Information for 7-SGTTGCYGGGYRRCKR (Motif 15)

A T G C A C T G A C G T A G C T A C T G A G T C A G T C C A T G A C T G A C T G G A T C C T G A C T G A A G T C A C T G C T A G
Reverse Opposite:
A G T C G T A C A C T G A G C T A G C T C T A G A G T C A G T C G T A C C T A G A C T G A G T C C T G A C G T A A G T C A T C G
p-value:1e-8
log p-value:-1.982e+01
Information Content per bp:1.819
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.6 +/- 13.9bp
Average Position of motif in Background63.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:SGTTGCYGGGYRRCKR
KGTTGCTAGGMAACA-
 A T G C A C T G A C G T A G C T A C T G A G T C A G T C C A T G A C T G A C T G G A T C C T G A C T G A A G T C A C T G C T A G
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--SGTTGCYGGGYRRCKR
NCCGTTGCTANGNGN---
 A C G T A C G T A T G C A C T G A C G T A G C T A C T G A G T C A G T C C A T G A C T G A C T G G A T C C T G A C T G A A G T C A C T G C T A G
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-SGTTGCYGGGYRRCKR
CTGTTGCTAGGS-----
 A C G T A T G C A C T G A C G T A G C T A C T G A G T C A G T C C A T G A C T G A C T G G A T C C T G A C T G A A G T C A C T G C T A G
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--SGTTGCYGGGYRRCKR
NNCGTTGCTATGGNN---
 A C G T A C G T A T G C A C T G A C G T A G C T A C T G A G T C A G T C C A T G A C T G A C T G G A T C C T G A C T G A A G T C A C T G C T A G
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------SGTTGCYGGGYRRCKR-
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C G T A G C T A C T G A G T C A G T C C A T G A C T G A C T G G A T C C T G A C T G A A G T C A C T G C T A G A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:SGTTGCYGGGYRRCKR
--WDNCTGGGCA----
 A T G C A C T G A C G T A G C T A C T G A G T C A G T C C A T G A C T G A C T G G A T C C T G A C T G A A G T C A C T G C T A G
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SGTTGCYGGGYRRCKR
-GTTGCCATGGNAAC-
 A T G C A C T G A C G T A G C T A C T G A G T C A G T C C A T G A C T G A C T G G A T C C T G A C T G A A G T C A C T G C T A G
A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C A C G T

STAT3/MA0144.2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:SGTTGCYGGGYRRCKR
--CTTCTGGGAAA---
 A T G C A C T G A C G T A G C T A C T G A G T C A G T C C A T G A C T G A C T G G A T C C T G A C T G A A G T C A C T G C T A G
A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:SGTTGCYGGGYRRCKR
-TTTGGCGGGAAA---
 A T G C A C T G A C G T A G C T A C T G A G T C A G T C C A T G A C T G A C T G G A T C C T G A C T G A A G T C A C T G C T A G
A C G T C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:SGTTGCYGGGYRRCKR
--TTTCCAGGAAATGG
 A T G C A C T G A C G T A G C T A C T G A G T C A G T C C A T G A C T G A C T G G A T C C T G A C T G A A G T C A C T G C T A G
A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G