Information for 6-GGATTTTAGT (Motif 10)

A C T G C T A G C G T A A C G T A C G T C G A T A G C T C T G A A T C G A C G T
Reverse Opposite:
G T C A A T G C G A C T C T G A C G T A C G T A G T C A A C G T A G T C G T A C
p-value:1e-10
log p-value:-2.355e+01
Information Content per bp:1.848
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif44.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets36.3 +/- 20.5bp
Average Position of motif in Background50.6 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGATTTTAGT-----
NNANTTTTATTGGNNN
 A C G T A C T G C T A G C G T A A C G T A C G T C G A T A G C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGATTTTAGT
NGGGATTA----
 A C G T A C G T A C T G C T A G C G T A A C G T A C G T C G A T A G C T C T G A A T C G A C G T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

PH0126.1_Obox6/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GGATTTTAGT
AAAAACGGATTATTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C G T A C G T C G A T A G C T C T G A A T C G A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGATTTTAGT
CNGTGATTTN---
 A C G T A C G T A C G T A C T G C T A G C G T A A C G T A C G T C G A T A G C T C T G A A T C G A C G T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGATTTTAGT-----
NNAATTTTATTGGNTN
 A C G T A C T G C T A G C G T A A C G T A C G T C G A T A G C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGATTTTAGT
NGGATTAA---
 A C G T A C T G C T A G C G T A A C G T A C G T C G A T A G C T C T G A A T C G A C G T
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGATTTTAGT-
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C G T A C G T C G A T A G C T C T G A A T C G A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

RHOXF1/MA0719.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGATTTTAGT
NGGATTAN---
 A C G T A C T G C T A G C G T A A C G T A C G T C G A T A G C T C T G A A T C G A C G T
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGATTTTAGT
GGGATTAA---
 A C G T A C T G C T A G C G T A A C G T A C G T C G A T A G C T C T G A A T C G A C G T
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGATTTTAGT----
NCGTATTATAATCNTA
 A C G T A C G T A C T G C T A G C G T A A C G T A C G T C G A T A G C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A