Information for 8-GGWAAATACAGTMTWC (Motif 8)

C A T G A C T G C G A T C G T A C G T A C G T A A G C T C G T A T G A C C G T A A C T G A C G T G T A C A C G T C G A T T G A C
Reverse Opposite:
A C T G C G T A C G T A A C T G C G T A G T A C A C G T A C T G C G A T C T G A C G A T C G A T A C G T C G T A G T A C G A T C
p-value:1e-13
log p-value:-3.159e+01
Information Content per bp:1.751
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.5 +/- 29.5bp
Average Position of motif in Background85.5 +/- 3.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGWAAATACAGTMTWC
CAAAAGTAAACAAAG-----
 A C G T A C G T A C G T A C G T C A T G A C T G C G A T C G T A C G T A C G T A A G C T C G T A T G A C C G T A A C T G A C G T G T A C A C G T C G A T T G A C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGWAAATACAGTMTWC
AAAAAGTAAACAAAGAC---
 A C G T A C G T A C G T A C G T C A T G A C T G C G A T C G T A C G T A C G T A A G C T C G T A T G A C C G T A A C T G A C G T G T A C A C G T C G A T T G A C
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGWAAATACAGTMTWC
AAAAAGTAAACAAACAC---
 A C G T A C G T A C G T A C G T C A T G A C T G C G A T C G T A C G T A C G T A A G C T C G T A T G A C C G T A A C T G A C G T G T A C A C G T C G A T T G A C
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T A C G T A C G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGWAAATACAGTMTWC
AAAAAGTAAACAAACAC---
 A C G T A C G T A C G T A C G T C A T G A C T G C G A T C G T A C G T A C G T A A G C T C G T A T G A C C G T A A C T G A C G T G T A C A C G T C G A T T G A C
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T A C G T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGWAAATACAGTMTWC
---AAATTAATTAATC
 C A T G A C T G C G A T C G T A C G T A C G T A A G C T C G T A T G A C C G T A A C T G A C G T G T A C A C G T C G A T T G A C
A C G T A C G T A C G T C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGWAAATACAGTMTWC
AAAGTAAACAAAAATT--
 A C G T A C G T C A T G A C T G C G A T C G T A C G T A C G T A A G C T C G T A T G A C C G T A A C T G A C G T G T A C A C G T C G A T T G A C
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGWAAATACAGTMTWC
AGAAACGAAAGT----
 C A T G A C T G C G A T C G T A C G T A C G T A A G C T C G T A T G A C C G T A A C T G A C G T G T A C A C G T C G A T T G A C
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGWAAATACAGTMTWC
AACAATGTGCAGTGTT-
 A C G T C A T G A C T G C G A T C G T A C G T A C G T A A G C T C G T A T G A C C G T A A C T G A C G T G T A C A C G T C G A T T G A C
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGWAAATACAGTMTWC
-GHATATKCAT-----
 C A T G A C T G C G A T C G T A C G T A C G T A A G C T C G T A T G A C C G T A A C T G A C G T G T A C A C G T C G A T T G A C
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

PH0072.1_Hoxc8/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GGWAAATACAGTMTWC
TTGGGGTAATTAACGT----
 A C G T A C G T A C G T A C G T C A T G A C T G C G A T C G T A C G T A C G T A A G C T C G T A T G A C C G T A A C T G A C G T G T A C A C G T C G A T T G A C
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T A C G T A C G T A C G T A C G T