Information for 23-AGATCTAACAATC (Motif 38)

C G T A C T A G C G T A A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A C G A T A C G T A C T G A C G T A C G T C G T A A C T G C G T A A C G T A G T C A C G T
p-value:1e-7
log p-value:-1.709e+01
Information Content per bp:1.951
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 23.9bp
Average Position of motif in Background62.4 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:AGATCTAACAATC
-----NAACAAT-
 C G T A C T A G C G T A A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGATCTAACAATC
-AAACAAACATTC
 C G T A C T A G C G T A A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G T C
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:AGATCTAACAATC
------AACAAT-
 C G T A C T A G C G T A A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGATCTAACAATC
---GTAAACAAT-
 C G T A C T A G C G T A A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G T C
A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGATCTAACAATC--
AAAAATAACAAACGG
 C G T A C T A G C G T A A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGATCTAACAATC-----
--AATGAACAATGGAATT
 C G T A C T A G C G T A A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGATCTAACAATC----
--NNNTAACAATTATAN
 C G T A C T A G C G T A A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGATCTAACAATC-----
-TNCNNAACAATTTTTNC
 C G T A C T A G C G T A A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGATCTAACAATC--
-NNCNNAACAATTNT
 C G T A C T A G C G T A A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T A C G T
A C G T G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGATCTAACAATC-
-----GAACAATGG
 C G T A C T A G C G T A A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G