p-value: | 1e-120 |
log p-value: | -2.765e+02 |
Information Content per bp: | 1.659 |
Number of Target Sequences with motif | 127.0 |
Percentage of Target Sequences with motif | 17.02% |
Number of Background Sequences with motif | 398.8 |
Percentage of Background Sequences with motif | 0.83% |
Average Position of motif in Targets | 48.7 +/- 22.6bp |
Average Position of motif in Background | 51.2 +/- 29.3bp |
Strand Bias (log2 ratio + to - strand density) | -0.0 |
Multiplicity (# of sites on avg that occur together) | 1.05 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 1 |
Score: | 0.94 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTATTGTNATGCAAAT -CATTGTTATGCAAAT |
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Pou5f1::Sox2/MA0142.1/Jaspar
Match Rank: | 2 |
Score: | 0.93 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTATTGTNATGCAAAT -CTTTGTTATGCAAAT |
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Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 3 |
Score: | 0.77 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CTATTGTNATGCAAAT ------TTATGCAAAT |
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Pou2f3/MA0627.1/Jaspar
Match Rank: | 4 |
Score: | 0.75 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CTATTGTNATGCAAAT---- ----TTGTATGCAAATTAGA |
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PH0145.1_Pou2f3/Jaspar
Match Rank: | 5 |
Score: | 0.75 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CTATTGTNATGCAAAT---- ----TTGTATGCAAATTAGA |
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POU2F2/MA0507.1/Jaspar
Match Rank: | 6 |
Score: | 0.74 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CTATTGTNATGCAAAT--- ------ATATGCAAATNNN |
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PH0144.1_Pou2f2/Jaspar
Match Rank: | 7 |
Score: | 0.74 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CTATTGTNATGCAAAT---- ----TTGTATGCAAATTAGA |
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POU3F1/MA0786.1/Jaspar
Match Rank: | 8 |
Score: | 0.74 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CTATTGTNATGCAAAT-- ------TTATGCAAATTA |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 9 |
Score: | 0.73 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CTATTGTNATGCAAAT--- -------TATGCWAATBAV |
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POU5F1B/MA0792.1/Jaspar
Match Rank: | 10 |
Score: | 0.73 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CTATTGTNATGCAAAT -------TATGCAAAT |
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