Information for 12-RWGTAATTTAMCC (Motif 18)

C T A G C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T C G T A G T A C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C C G A T G A C T
p-value:1e-11
log p-value:-2.563e+01
Information Content per bp:1.899
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 18.1bp
Average Position of motif in Background32.1 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd3/MA0912.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-RWGTAATTTAMCC--
ANGNTAATTANCNCAN
 A C G T C T A G C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T C G T A G T A C A G T C A G T C A C G T A C G T
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A

PH0079.1_Hoxd3/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-RWGTAATTTAMCC--
ANGNTAATTANCNCAN
 A C G T C T A G C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T C G T A G T A C A G T C A G T C A C G T A C G T
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A

UNCX/MA0721.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:RWGTAATTTAMCC
--NTAATTAN---
 C T A G C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T C G T A G T A C A G T C A G T C
A C G T A C G T A G C T C G A T C T G A C T G A C A G T G A C T C T G A T C A G A C G T A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:RWGTAATTTAMCC
-AGTAATTAAC--
 C T A G C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T C G T A G T A C A G T C A G T C
A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C A C G T A C G T

PH0054.1_Hoxa7_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---RWGTAATTTAMCC-
GNNNATTAATTAANNCG
 A C G T A C G T A C G T C T A G C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T C G T A G T A C A G T C A G T C A C G T
C A T G T G A C G C A T G C A T C T G A C A G T G A C T G C T A C G T A G C A T C G A T C T G A G T C A G A T C C A G T A G T C A T C G

VAX1/MA0722.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:RWGTAATTTAMCC
--NTAATTAG---
 C T A G C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T C G T A G T A C A G T C A G T C
A C G T A C G T C T A G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A C G T A C G T A C G T

SHOX/MA0630.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:RWGTAATTTAMCC
--TTAATTGG---
 C T A G C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T C G T A G T A C A G T C A G T C
A C G T A C G T G A C T G C A T T C G A C T G A A C G T C G A T C T A G T C A G A C G T A C G T A C G T

VAX2/MA0723.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:RWGTAATTTAMCC
--NTAATTAG---
 C T A G C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T C G T A G T A C A G T C A G T C
A C G T A C G T T C A G G A C T G T C A G C T A C G A T C A G T C T G A T C A G A C G T A C G T A C G T

Prrx2/MA0075.2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:RWGTAATTTAMCC
--NTAATTGN---
 C T A G C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T C G T A G T A C A G T C A G T C
A C G T A C G T A G C T C G A T C T G A C T G A A C G T A G C T C T A G T C A G A C G T A C G T A C G T

PRRX1/MA0716.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:RWGTAATTTAMCC
--NTAATTAN---
 C T A G C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T C G T A G T A C A G T C A G T C
A C G T A C G T A G C T C G A T C T G A C T G A C A G T A G C T C T G A T C A G A C G T A C G T A C G T