Information for 11-GGGGATTAAG (Motif 16)

C T A G C T A G C T A G A C T G G T C A A C G T A C G T C T G A C T G A A T C G
Reverse Opposite:
A T G C G A C T A G C T C G T A C G T A A C G T A G T C A G T C A G T C A G T C
p-value:1e-11
log p-value:-2.608e+01
Information Content per bp:1.858
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif65.9
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets57.7 +/- 25.0bp
Average Position of motif in Background49.1 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:GGGGATTAAG
-GGGATTANN
 C T A G C T A G C T A G A C T G G T C A A C G T A C G T C T G A C T G A A T C G
A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

GSC2/MA0891.1/Jaspar

Match Rank:2
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GGGGATTAAG
GNGGATTAGN
 C T A G C T A G C T A G A C T G G T C A A C G T A C G T C T G A C T G A A T C G
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GGGGATTAAG
VRGGATTARN
 C T A G C T A G C T A G A C T G G T C A A C G T A C G T C T G A C T G A A T C G
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0123.1_Obox3/Jaspar

Match Rank:4
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----GGGGATTAAG---
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T C T A G C T A G C T A G A C T G G T C A A C G T A C G T C T G A C T G A A T C G A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GGGGATTAAG
NNGGATTAGN
 C T A G C T A G C T A G A C T G G T C A A C G T A C G T C T G A C T G A A T C G
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PH0121.1_Obox1/Jaspar

Match Rank:6
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----GGGGATTAAG---
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T A C G T C T A G C T A G C T A G A C T G G T C A A C G T A C G T C T G A C T G A A T C G A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GGGGATTAAG
-GGGATTAA-
 C T A G C T A G C T A G A C T G G T C A A C G T A C G T C T G A C T G A A T C G
A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T

PH0122.1_Obox2/Jaspar

Match Rank:8
Score:0.85
Offset:-4
Orientation:forward strand
Alignment:----GGGGATTAAG---
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T C T A G C T A G C T A G A C T G G T C A A C G T A C G T C T G A C T G A A T C G A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.85
Offset:-4
Orientation:forward strand
Alignment:----GGGGATTAAG--
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T A C G T C T A G C T A G C T A G A C T G G T C A A C G T A C G T C T G A C T G A A T C G A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----GGGGATTAAG---
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T A C G T C T A G C T A G C T A G A C T G G T C A A C G T A C G T C T G A C T G A A T C G A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T