Information for 9-GCGCCCTCTAGTG (Motif 9)

C T A G A T G C A C T G A T G C A G T C G T A C A C G T T A G C G A C T T C G A A C T G G A C T A T C G
Reverse Opposite:
A T G C C T G A T G A C A G C T C T G A A C T G T G C A C A T G C T A G T A C G T G A C A T C G A G T C
p-value:1e-13
log p-value:-3.088e+01
Information Content per bp:1.649
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.39%
Number of Background Sequences with motif405.9
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets52.9 +/- 28.3bp
Average Position of motif in Background48.8 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----GCGCCCTCTAGTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T C T A G A T G C A C T G A T G C A G T C G T A C A C G T T A G C G A C T T C G A A C T G G A C T A T C G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GCGCCCTCTAGTG----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T C T A G A T G C A C T G A T G C A G T C G T A C A C G T T A G C G A C T T C G A A C T G G A C T A T C G A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GCGCCCTCTAGTG----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T C T A G A T G C A C T G A T G C A G T C G T A C A C G T T A G C G A C T T C G A A C T G G A C T A T C G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCGCCCTCTAGTG
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T C T A G A T G C A C T G A T G C A G T C G T A C A C G T T A G C G A C T T C G A A C T G G A C T A T C G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCCTCTAGTG
NNNGGGGCGCCCCCNN---
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C A C T G A T G C A G T C G T A C A C G T T A G C G A C T T C G A A C T G G A C T A T C G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCGCCCTCTAGTG
GCCMCGCCCMCY----
 A C G T A C G T A C G T C T A G A T G C A C T G A T G C A G T C G T A C A C G T T A G C G A C T T C G A A C T G G A C T A T C G
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCGCCCTCTAGTG
AGCGCGCC--------
 A C G T A C G T A C G T C T A G A T G C A C T G A T G C A G T C G T A C A C G T T A G C G A C T T C G A A C T G G A C T A T C G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCGCCCTCTAGTG-
NTGCCCANNGGTNA
 C T A G A T G C A C T G A T G C A G T C G T A C A C G T T A G C G A C T T C G A A C T G G A C T A T C G A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCCTCTAGTG
ANCGCGCGCCCTTNN---
 A C G T A C G T A C G T A C G T A C G T C T A G A T G C A C T G A T G C A G T C G T A C A C G T T A G C G A C T T C G A A C T G G A C T A T C G
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T A C G T A C G T

KLF14/MA0740.1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCGCCCTCTAGTG
GGCCACGCCCCCTT---
 A C G T A C G T A C G T A C G T C T A G A T G C A C T G A T G C A G T C G T A C A C G T T A G C G A C T T C G A A C T G G A C T A T C G
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T A C G T A C G T A C G T