Information for 3-CCAAGATGGCGGC (Motif 4)

A G T C T G A C C G T A G C T A T A C G C G T A A G C T A C T G A C T G A T G C A T C G T C A G G A T C
Reverse Opposite:
C T A G A G T C T A G C A T C G A G T C A G T C C T G A A C G T A T G C C G A T A C G T A C T G T C A G
p-value:1e-31
log p-value:-7.261e+01
Information Content per bp:1.721
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif6.15%
Number of Background Sequences with motif280.2
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets53.2 +/- 26.9bp
Average Position of motif in Background56.2 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.96
Offset:1
Orientation:forward strand
Alignment:CCAAGATGGCGGC
-CAAGATGGCGGC
 A G T C T G A C C G T A G C T A T A C G C G T A A G C T A C T G A C T G A T G C A T C G T C A G G A T C
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.95
Offset:1
Orientation:forward strand
Alignment:CCAAGATGGCGGC
-CAAGATGGCGGC
 A G T C T G A C C G T A G C T A T A C G C G T A A G C T A C T G A C T G A T G C A T C G T C A G G A T C
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CCAAGATGGCGGC-
---TAATGGCGGNC
 A G T C T G A C C G T A G C T A T A C G C G T A A G C T A C T G A C T G A T G C A T C G T C A G G A T C A C G T
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCAAGATGGCGGC-----
--AAAATGGCGCCATTTT
 A G T C T G A C C G T A G C T A T A C G C G T A A G C T A C T G A C T G A T G C A T C G T C A G G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCAAGATGGCGGC
AACAGATGGC---
 A G T C T G A C C G T A G C T A T A C G C G T A A G C T A C T G A C T G A T G C A T C G T C A G G A T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCAAGATGGCGGC-
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A G T C T G A C C G T A G C T A T A C G C G T A A G C T A C T G A C T G A T G C A T C G T C A G G A T C A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

E2F3/MA0469.2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCAAGATGGCGGC------
-AAAAATGGCGCCATTTTT
 A G T C T G A C C G T A G C T A T A C G C G T A A G C T A C T G A C T G A T G C A T C G T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCAAGATGGCGGC
-----TTGGCA--
 A G T C T G A C C G T A G C T A T A C G C G T A A G C T A C T G A C T G A T G C A T C G T C A G G A T C
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CCAAGATGGCGGC
----NTTGGCANN
 A G T C T G A C C G T A G C T A T A C G C G T A A G C T A C T G A C T G A T G C A T C G T C A G G A T C
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCAAGATGGCGGC-----
-NNNNTTGGCGCCGANNN
 A G T C T G A C C G T A G C T A T A C G C G T A A G C T A C T G A C T G A T G C A T C G T C A G G A T C A C G T A C G T A C G T A C G T A C G T
A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G