Information for 7-TGTGAGAAATAGAATY (Motif 6)

A C G T A C T G C G A T C A T G C T G A A C T G G T C A C G T A G C T A A C G T C T G A T C A G C G T A G T C A C G A T G A C T
Reverse Opposite:
C T G A G C T A C A G T A C G T A G T C A G C T G T C A C A G T A C G T A C G T G T A C A G C T G A T C C G T A A G T C G T C A
p-value:1e-14
log p-value:-3.286e+01
Information Content per bp:1.745
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.4 +/- 29.5bp
Average Position of motif in Background66.2 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTGAGAAATAGAATY
CSTGGGAAAD------
 A C G T A C T G C G A T C A T G C T G A A C T G G T C A C G T A G C T A A C G T C T G A T C A G C G T A G T C A C G A T G A C T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGTGAGAAATAGAATY
ATGCTAAAAATAGAA--
 A C G T A C G T A C T G C G A T C A T G C T G A A C T G G T C A C G T A G C T A A C G T C T G A T C A G C G T A G T C A C G A T G A C T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGTGAGAAATAGAATY
-GCTAAAAATAGC---
 A C G T A C T G C G A T C A T G C T G A A C T G G T C A C G T A G C T A A C G T C T G A T C A G C G T A G T C A C G A T G A C T
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGTGAGAAATAGAATY
-DCYAAAAATAGM---
 A C G T A C T G C G A T C A T G C T G A A C T G G T C A C G T A G C T A A C G T C T G A T C A G C G T A G T C A C G A T G A C T
A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTGAGAAATAGAATY
AGGTGTGAAA-------
 A C G T A C G T A C T G C G A T C A T G C T G A A C T G G T C A C G T A G C T A A C G T C T G A T C A G C G T A G T C A C G A T G A C T
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGTGAGAAATAGAATY
AAGATCGGAANTNNNA--
 A C G T A C G T A C G T A C T G C G A T C A T G C T G A A C T G G T C A C G T A G C T A A C G T C T G A T C A G C G T A G T C A C G A T G A C T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGTGAGAAATAGAATY
AGGTGTTAAT-------
 A C G T A C G T A C T G C G A T C A T G C T G A A C T G G T C A C G T A G C T A A C G T C T G A T C A G C G T A G T C A C G A T G A C T
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGTGAGAAATAGAATY
AAGGTGTGAAAAT-----
 A C G T A C G T A C G T A C T G C G A T C A T G C T G A A C T G G T C A C G T A G C T A A C G T C T G A T C A G C G T A G T C A C G A T G A C T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGTGAGAAATAGAATY
AAGGTGTKAA--------
 A C G T A C G T A C G T A C T G C G A T C A T G C T G A A C T G G T C A C G T A G C T A A C G T C T G A T C A G C G T A G T C A C G A T G A C T
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGTGAGAAATAGAATY
AGGTGTGAAM-------
 A C G T A C G T A C T G C G A T C A T G C T G A A C T G G T C A C G T A G C T A A C G T C T G A T C A G C G T A G T C A C G A T G A C T
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T