p-value: | 1e-9 |
log p-value: | -2.217e+01 |
Information Content per bp: | 1.788 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.67% |
Number of Background Sequences with motif | 2.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 62.8 +/- 23.4bp |
Average Position of motif in Background | 51.4 +/- 20.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0060.1_Smad3_1/Jaspar
Match Rank: | 1 |
Score: | 0.73 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----YCCRGACAKYTSCWMW CAAATCCAGACATCACA--- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.68 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | YCCRGACAKYTSCWMW -CCAGACAG------- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | YCCRGACAKYTSCWMW -CCAGACRSVB----- |
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PB0193.1_Tcfe2a_2/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | YCCRGACAKYTSCWMW- CCNNACCATCTGGCCTN |
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Tcf12/MA0521.1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | YCCRGACAKYTSCWMW ----AACAGCTGCAG- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --YCCRGACAKYTSCWMW ATGCCAGACN-------- |
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Myog/MA0500.1/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | YCCRGACAKYTSCWMW ----GACAGCTGCAG- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | YCCRGACAKYTSCWMW -BCAGACWA------- |
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PB0047.1_Myf6_1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | YCCRGACAKYTSCWMW-- --CNGACACCTGTTCNNN |
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Myod1/MA0499.1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | YCCRGACAKYTSCWMW -NGNGACAGCTGCN-- |
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