Information for 11-ACACAAAGCG (Motif 20)

C G T A A G T C C G T A A G T C C G T A C G T A G C T A A C T G T A G C T A C G
Reverse Opposite:
A T G C A T C G A G T C C A G T C G A T A C G T A C T G A C G T A C T G A C G T
p-value:1e-9
log p-value:-2.243e+01
Information Content per bp:1.863
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif140.6
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets40.0 +/- 26.3bp
Average Position of motif in Background51.7 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:ACACAAAGCG
--ACAAAG--
 C G T A A G T C C G T A A G T C C G T A C G T A G C T A A C T G T A G C T A C G
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-ACACAAAGCG
VRRACAAWGG-
 A C G T C G T A A G T C C G T A A G T C C G T A C G T A G C T A A C T G T A G C T A C G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---ACACAAAGCG--
CTCACACAATGGCGC
 A C G T A C G T A C G T C G T A A G T C C G T A A G T C C G T A C G T A G C T A A C T G T A G C T A C G A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:ACACAAAGCG----
--ACAAAGGNBCCT
 C G T A A G T C C G T A A G T C C G T A C G T A G C T A A C T G T A G C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ACACAAAGCG
AAAACAAAGG-
 A C G T C G T A A G T C C G T A A G T C C G T A C G T A G C T A A C T G T A G C T A C G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ACACAAAGCG--
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A G T C C G T A C G T A G C T A A C T G T A G C T A C G A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACACAAAGCG
AAAACAATGG-
 A C G T C G T A A G T C C G T A A G T C C G T A C G T A G C T A A C T G T A G C T A C G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACACAAAGCG
-RACAAWGG-
 C G T A A G T C C G T A A G T C C G T A C G T A G C T A A C T G T A G C T A C G
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACACAAAGCG
RNAACAATGG-
 A C G T C G T A A G T C C G T A A G T C C G T A C G T A G C T A A C T G T A G C T A C G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACACAAAGCG
GGAACAAAGR-
 A C G T C G T A A G T C C G T A A G T C C G T A C G T A G C T A A C T G T A G C T A C G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T