Information for 10-CTCGCTYTGGCCT (Motif 16)

A T G C A G C T T A G C A T C G A T G C A G C T A G C T A C G T A T C G A T C G A G T C T G A C A G C T
Reverse Opposite:
C T G A A C T G A C T G A T G C A T G C C G T A T C G A C T G A A T C G T A G C A T C G C T G A A T C G
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.713
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif86.4
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets46.2 +/- 25.7bp
Average Position of motif in Background51.3 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTCGCTYTGGCCT-
GGGGCCGAGGCCTG
 A T G C A G C T T A G C A T C G A T G C A G C T A G C T A C G T A T C G A T C G A G T C T G A C A G C T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CTCGCTYTGGCCT-
-----NTTGGCANN
 A T G C A G C T T A G C A T C G A T G C A G C T A G C T A C G T A T C G A T C G A G T C T G A C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.63
Offset:6
Orientation:forward strand
Alignment:CTCGCTYTGGCCT
------TTGGCA-
 A T G C A G C T T A G C A T C G A T G C A G C T A G C T A C G T A T C G A T C G A G T C T G A C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCGCTYTGGCCT-
CCCCCTTGGGCCCC
 A T G C A G C T T A G C A T C G A T G C A G C T A G C T A C G T A T C G A T C G A G T C T G A C A G C T A C G T
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCGCTYTGGCCT
---GGTCTGGCAT
 A T G C A G C T T A G C A T C G A T G C A G C T A G C T A C G T A T C G A T C G A G T C T G A C A G C T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTCGCTYTGGCCT--
TGACCTTTGCCCTAN
 A T G C A G C T T A G C A T C G A T G C A G C T A G C T A C G T A T C G A T C G A G T C T G A C A G C T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCGCTYTGGCCT-
TGACCTTTGCCCTA
 A T G C A G C T T A G C A T C G A T G C A G C T A G C T A C G T A T C G A T C G A G T C T G A C A G C T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCGCTYTGGCCT
-TGGGTGTGGC--
 A T G C A G C T T A G C A T C G A T G C A G C T A G C T A C G T A T C G A T C G A G T C T G A C A G C T
A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CTCGCTYTGGCCT--
-------TGACCTYA
 A T G C A G C T T A G C A T C G A T G C A G C T A G C T A C G T A T C G A T C G A G T C T G A C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTCGCTYTGGCCT-
----NNTTGGCANN
 A T G C A G C T T A G C A T C G A T G C A G C T A G C T A C G T A T C G A T C G A G T C T G A C A G C T A C G T
A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C