Information for 10-ATGCTGGCATGCTAAT (Motif 9)

G T C A A C G T C T A G T A G C C G A T A C T G C T A G A G T C G C T A C A G T T A C G G A T C G A C T C G T A T G C A C G A T
Reverse Opposite:
G C T A A C G T G C A T C T G A C T A G A T G C G C T A C G A T C T A G G A T C G T A C C G T A A C T G A G T C G T C A C A G T
p-value:1e-13
log p-value:-3.077e+01
Information Content per bp:1.652
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif49.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets42.9 +/- 21.3bp
Average Position of motif in Background52.7 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:ATGCTGGCATGCTAAT---
-------TATGCWAATBAV
 G T C A A C G T C T A G T A G C C G A T A C T G C T A G A G T C G C T A C A G T T A C G G A T C G A C T C G T A T G C A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Pou2f3/MA0627.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ATGCTGGCATGCTAAT----
----TTGTATGCAAATTAGA
 G T C A A C G T C T A G T A G C C G A T A C T G C T A G A G T C G C T A C A G T T A C G G A T C G A C T C G T A T G C A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ATGCTGGCATGCTAAT----
----TTGTATGCAAATTAGA
 G T C A A C G T C T A G T A G C C G A T A C T G C T A G A G T C G C T A C A G T T A C G G A T C G A C T C G T A T G C A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.58
Offset:7
Orientation:forward strand
Alignment:ATGCTGGCATGCTAAT---
-------WATGCAAATGAG
 G T C A A C G T C T A G T A G C C G A T A C T G C T A G A G T C G C T A C A G T T A C G G A T C G A C T C G T A T G C A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

POU3F4/MA0789.1/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:forward strand
Alignment:ATGCTGGCATGCTAAT
-------TATGCAAAT
 G T C A A C G T C T A G T A G C C G A T A C T G C T A G A G T C G C T A C A G T T A C G G A T C G A C T C G T A T G C A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATGCTGGCATGCTAAT----
----TTGTATGCAAATTAGA
 G T C A A C G T C T A G T A G C C G A T A C T G C T A G A G T C G C T A C A G T T A C G G A T C G A C T C G T A T G C A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATGCTGGCATGCTAAT
--CCWGGAATGY----
 G T C A A C G T C T A G T A G C C G A T A C T G C T A G A G T C G C T A C A G T T A C G G A T C G A C T C G T A T G C A C G A T
A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTGGCATGCTAAT
AAAWWTGCTGACWWD-----
 A C G T A C G T A C G T A C G T G T C A A C G T C T A G T A G C C G A T A C T G C T A G A G T C G C T A C A G T T A C G G A T C G A C T C G T A T G C A C G A T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:ATGCTGGCATGCTAAT
-------TATGCAAAT
 G T C A A C G T C T A G T A G C C G A T A C T G C T A G A G T C G C T A C A G T T A C G G A T C G A C T C G T A T G C A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATGCTGGCATGCTAAT
AAAATGCTGACT-------
 A C G T A C G T A C G T G T C A A C G T C T A G T A G C C G A T A C T G C T A G A G T C G C T A C A G T T A C G G A T C G A C T C G T A T G C A C G A T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T