Information for 23-AGAAGCCACACATTCT (Motif 31)

C G T A A C T G T G C A C G T A C T A G G T A C G T A C C G T A G T A C C G T A A G T C C G T A C G A T A C G T A T G C A C G T
Reverse Opposite:
T C G A A T C G C G T A C G T A C G A T A C T G C G A T A C T G A C G T A C T G A C T G G A T C A C G T A C G T A G T C C G A T
p-value:1e-9
log p-value:-2.241e+01
Information Content per bp:1.753
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 24.3bp
Average Position of motif in Background37.9 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGAAGCCACACATTCT
TCCAATCCACA------
 A C G T C G T A A C T G T G C A C G T A C T A G G T A C G T A C C G T A G T A C C G T A A G T C C G T A C G A T A C G T A T G C A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGAAGCCACACATTCT
--AAACCACANN----
 C G T A A C T G T G C A C G T A C T A G G T A C G T A C C G T A G T A C C G T A A G T C C G T A C G A T A C G T A T G C A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGAAGCCACACATTCT
---AAACAAACATTC-
 C G T A A C T G T G C A C G T A C T A G G T A C G T A C C G T A G T A C C G T A A G T C C G T A C G A T A C G T A T G C A C G T
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:4
Score:0.55
Offset:8
Orientation:forward strand
Alignment:AGAAGCCACACATTCT--
--------CACATTCCAT
 C G T A A C T G T G C A C G T A C T A G G T A C G T A C C G T A G T A C C G T A A G T C C G T A C G A T A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

TEAD1/MA0090.2/Jaspar

Match Rank:5
Score:0.54
Offset:8
Orientation:forward strand
Alignment:AGAAGCCACACATTCT--
--------CACATTCCAT
 C G T A A C T G T G C A C G T A C T A G G T A C G T A C C G T A G T A C C G T A A G T C C G T A C G A T A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGAAGCCACACATTCT
--AAACCACAGAN---
 C G T A A C T G T G C A C G T A C T A G G T A C G T A C C G T A G T A C C G T A A G T C C G T A C G A T A C G T A T G C A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGAAGCCACACATTCT
-NWAACCACADNN---
 C G T A A C T G T G C A C G T A C T A G G T A C G T A C C G T A G T A C C G T A A G T C C G T A C G A T A C G T A T G C A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGAAGCCACACATTCT
SSAATCCACANN----
 C G T A A C T G T G C A C G T A C T A G G T A C G T A C C G T A G T A C C G T A A G T C C G T A C G A T A C G T A T G C A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGAAGCCACACATTCT-
-AGCGGCACACACGCAA
 C G T A A C T G T G C A C G T A C T A G G T A C G T A C C G T A G T A C C G T A A G T C C G T A C G A T A C G T A T G C A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGAAGCCACACATTCT
-NAAACCACAG-----
 C G T A A C T G T G C A C G T A C T A G G T A C G T A C C G T A G T A C C G T A A G T C C G T A C G A T A C G T A T G C A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T