Information for 12-GCTTAAAAAT (Motif 15)

A C T G A G T C C G A T C G A T C T G A C T G A G T C A C G T A C T G A G A C T
Reverse Opposite:
C T G A A G C T A C G T A C G T A G C T G A C T C G T A C G T A C T A G A G T C
p-value:1e-10
log p-value:-2.310e+01
Information Content per bp:1.774
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif171.4
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets53.2 +/- 26.4bp
Average Position of motif in Background48.7 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCTTAAAAAT--
--TTTGAAACCG
 A C T G A G T C C G A T C G A T C T G A C T G A G T C A C G T A C T G A G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTTAAAAAT
CCTTTGATGT
 A C T G A G T C C G A T C G A T C T G A C T G A G T C A C G T A C T G A G A C T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTTAAAAAT
NGCTN------
 A C G T A C T G A G T C C G A T C G A T C T G A C T G A G T C A C G T A C T G A G A C T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTTAAAAAT
NATTCAAAT-
 A C T G A G T C C G A T C G A T C T G A C T G A G T C A C G T A C T G A G A C T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTTAAAAAT
AAGCTTG-----
 A C G T A C G T A C T G A G T C C G A T C G A T C T G A C T G A G T C A C G T A C T G A G A C T
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCTTAAAAAT---
CCGCATAGCAACGGA
 A C G T A C G T A C T G A G T C C G A T C G A T C T G A C T G A G T C A C G T A C T G A G A C T A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTTAAAAAT
TTCTTGGAAAN
 A C G T A C T G A G T C C G A T C G A T C T G A C T G A G T C A C G T A C T G A G A C T
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCTTAAAAAT-
-NATGGAAAAN
 A C T G A G T C C G A T C G A T C T G A C T G A G T C A C G T A C T G A G A C T A C G T
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCTTAAAAAT-
ATTTGCATAACAAAG
 A C G T A C G T A C G T A C G T A C T G A G T C C G A T C G A T C T G A C T G A G T C A C G T A C T G A G A C T A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTTAAAAAT--
CCTTTTATAGNC
 A C T G A G T C C G A T C G A T C T G A C T G A G T C A C G T A C T G A G A C T A C G T A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C