Information for 9-CTKCCTCCCAKTGTTT (Motif 12)

A G T C A G C T A C T G A G T C G T A C A C G T A G T C A G T C A G T C T G C A A C T G A C G T A C T G A G C T A C G T C G A T
Reverse Opposite:
C G T A C G T A C T G A G T A C G T C A T G A C A C G T A C T G A C T G C T A G C G T A A C T G A C T G T G A C C T G A A C T G
p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.782
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.4 +/- 32.5bp
Average Position of motif in Background44.8 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTKCCTCCCAKTGTTT
NNNTCCATCCCATAANN-
 A C G T A C G T A G T C A G C T A C T G A G T C G T A C A C G T A G T C A G T C A G T C T G C A A C T G A C G T A C T G A G C T A C G T C G A T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CTKCCTCCCAKTGTTT-
-------CCATTGTTYB
 A G T C A G C T A C T G A G T C G T A C A C G T A G T C A G T C A G T C T G C A A C T G A C G T A C T G A G C T A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTKCCTCCCAKTGTTT
------NCCATTGTTC
 A G T C A G C T A C T G A G T C G T A C A C G T A G T C A G T C A G T C T G C A A C T G A C G T A C T G A G C T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

PB0124.1_Gabpa_2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTKCCTCCCAKTGTTT
CCGTCTTCCCCCTCAC-
 A C G T A G T C A G C T A C T G A G T C G T A C A C G T A G T C A G T C A G T C T G C A A C T G A C G T A C T G A G C T A C G T C G A T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CTKCCTCCCAKTGTTT
-------CCTTTGTT-
 A G T C A G C T A C T G A G T C G T A C A C G T A G T C A G T C A G T C T G C A A C T G A C G T A C T G A G C T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CTKCCTCCCAKTGTTT
-------CCATTGTTC
 A G T C A G C T A C T G A G T C G T A C A C G T A G T C A G T C A G T C T G C A A C T G A C G T A C T G A G C T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTKCCTCCCAKTGTTT
-----TCCCCA-----
 A G T C A G C T A C T G A G T C G T A C A C G T A G T C A G T C A G T C T G C A A C T G A C G T A C T G A G C T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CTKCCTCCCAKTGTTT-
-------CCATTGTTTT
 A G T C A G C T A C T G A G T C G T A C A C G T A G T C A G T C A G T C T G C A A C T G A C G T A C T G A G C T A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTKCCTCCCAKTGTTT
------NCCATTGTTY
 A G T C A G C T A C T G A G T C G T A C A C G T A G T C A G T C A G T C T G C A A C T G A C G T A C T G A G C T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTKCCTCCCAKTGTTT
TCACCCCGCCCCAAATT-
 A C G T A C G T A G T C A G C T A C T G A G T C G T A C A C G T A G T C A G T C A G T C T G C A A C T G A C G T A C T G A G C T A C G T C G A T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T A C G T