Information for 9-AKTTTGCATAARG (Motif 11)

C G T A A C G T A C G T A G C T A G C T A T C G A G T C C T G A A C G T C G T A C T G A C T A G A C T G
Reverse Opposite:
A G T C A G C T A G C T A C G T C G T A A G C T A C T G A T G C C T G A C T G A C G T A G T A C A C G T
p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.829
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.2 +/- 21.4bp
Average Position of motif in Background62.4 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F1/MA0786.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AKTTTGCATAARG
TAATTTGCATAA--
 A C G T C G T A A C G T A C G T A G C T A G C T A T C G A G T C C T G A A C G T C G T A C T G A C T A G A C T G
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AKTTTGCATAARG
AATTTGCATANT-
 C G T A A C G T A C G T A G C T A G C T A T C G A G T C C T G A A C G T C G T A C T G A C T A G A C T G
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AKTTTGCATAARG
TAATTTGCATAA--
 A C G T C G T A A C G T A C G T A G C T A G C T A T C G A G T C C T G A A C G T C G T A C T G A C T A G A C T G
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AKTTTGCATAARG
-ATTTGCATAA--
 C G T A A C G T A C G T A G C T A G C T A T C G A G T C C T G A A C G T C G T A C T G A C T A G A C T G
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AKTTTGCATAARG
TNTAATTTGCATANNN
 A C G T A C G T A C G T C G T A A C G T A C G T A G C T A G C T A T C G A G T C C T G A A C G T C G T A C T G A C T A G A C T G
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AKTTTGCATAARG
-ATTTGCATA---
 C G T A A C G T A C G T A G C T A G C T A T C G A G T C C T G A A C G T C G T A C T G A C T A G A C T G
A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AKTTTGCATAARG
AAATTAGCATAAT-
 A C G T C G T A A C G T A C G T A G C T A G C T A T C G A G T C C T G A A C G T C G T A C T G A C T A G A C T G
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AKTTTGCATAARG
-ATTTGCATA---
 C G T A A C G T A C G T A G C T A G C T A T C G A G T C C T G A A C G T C G T A C T G A C T A G A C T G
A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AKTTTGCATAARG
TNTAATTTGCATACNA
 A C G T A C G T A C G T C G T A A C G T A C G T A G C T A G C T A T C G A G T C C T G A A C G T C G T A C T G A C T A G A C T G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AKTTTGCATAARG
TNTAATTTGCATACNA
 A C G T A C G T A C G T C G T A A C G T A C G T A G C T A G C T A T C G A G T C C T G A A C G T C G T A C T G A C T A G A C T G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A