Information for 1-GCCCTCTGGTGGC (Motif 1)

A C T G A G T C A G T C T G A C A G C T A G T C A G C T T C A G A T C G A G C T A C T G A C T G T A G C
Reverse Opposite:
A C T G A G T C T A G C C T G A T A G C A G T C T C G A A C T G C T G A A C T G A C T G C T A G G T A C
p-value:1e-29
log p-value:-6.763e+01
Information Content per bp:1.777
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif10.81%
Number of Background Sequences with motif195.5
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets51.9 +/- 21.8bp
Average Position of motif in Background49.0 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.87
Offset:-7
Orientation:forward strand
Alignment:-------GCCCTCTGGTGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C T G A C A G C T A G T C A G C T T C A G A T C G A G C T A C T G A C T G T A G C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.86
Offset:-5
Orientation:forward strand
Alignment:-----GCCCTCTGGTGGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C T G A C A G C T A G T C A G C T T C A G A T C G A G C T A C T G A C T G T A G C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.86
Offset:-4
Orientation:reverse strand
Alignment:----GCCCTCTGGTGGC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C T G A C A G C T A G T C A G C T T C A G A T C G A G C T A C T G A C T G T A G C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCCCTCTGGTGGC
GCCATCTGTT---
 A C T G A G T C A G T C T G A C A G C T A G T C A G C T T C A G A T C G A G C T A C T G A C T G T A G C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCTGGTGGC
NTGCCCANNGGTNA-
 A C G T A C G T A C T G A G T C A G T C T G A C A G C T A G T C A G C T T C A G A T C G A G C T A C T G A C T G T A G C
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCTGGTGGC
NTGCCCTTGGGCGN-
 A C G T A C G T A C T G A G T C A G T C T G A C A G C T A G T C A G C T T C A G A T C G A G C T A C T G A C T G T A G C
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCCTCTGGTGGC
ACCATCTGTT---
 A C T G A G T C A G T C T G A C A G C T A G T C A G C T T C A G A T C G A G C T A C T G A C T G T A G C
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCTGGTGGC
CACCCCCGGGGGGG
 A C G T A C T G A G T C A G T C T G A C A G C T A G T C A G C T T C A G A T C G A G C T A C T G A C T G T A G C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GCCCTCTGGTGGC
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C T G A C A G C T A G T C A G C T T C A G A T C G A G C T A C T G A C T G T A G C
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTCTGGTGGC-
TGWCCTCARNTGACC
 A C G T A C T G A G T C A G T C T G A C A G C T A G T C A G C T T C A G A T C G A G C T A C T G A C T G T A G C A C G T
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C