| p-value: | 1e-13 |
| log p-value: | -3.040e+01 |
| Information Content per bp: | 1.688 |
| Number of Target Sequences with motif | 79.0 |
| Percentage of Target Sequences with motif | 9.65% |
| Number of Background Sequences with motif | 1750.7 |
| Percentage of Background Sequences with motif | 3.76% |
| Average Position of motif in Targets | 49.2 +/- 24.9bp |
| Average Position of motif in Background | 50.3 +/- 35.4bp |
| Strand Bias (log2 ratio + to - strand density) | 0.4 |
| Multiplicity (# of sites on avg that occur together) | 1.11 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
PB0207.1_Zic3_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.78
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GCATGCTGTT---
NNTCCTGCTGTGNNN |
|
|
|
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
| Match Rank: | 2 |
| Score: | 0.76
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | GCATGCTGTT-
-CCTGCTGAGH |
|
|
|
PB0205.1_Zic1_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.75
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GCATGCTGTT---
TNTCCTGCTGTGNNG |
|
|
|
PB0206.1_Zic2_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.74
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GCATGCTGTT---
TCNCCTGCTGNGNNN |
|
|
|
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 5 |
| Score: | 0.68
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GCATGCTGTT
CCCCCTGCTGTG |
|
|
|
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer
| Match Rank: | 6 |
| Score: | 0.63
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GCATGCTGTT
ACTTCCTGTT |
|
|
|
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
| Match Rank: | 7 |
| Score: | 0.62
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----GCATGCTGTT-
GGCCYCCTGCTGDGH |
|
|
|
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer
| Match Rank: | 8 |
| Score: | 0.58
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GCATGCTGTT
ACATCCTGNT |
|
|
|
POL009.1_DCE_S_II/Jaspar
| Match Rank: | 9 |
| Score: | 0.58
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | GCATGCTGTT
----GCTGTG |
|
|
|
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer
| Match Rank: | 10 |
| Score: | 0.57
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----GCATGCTGTT-
AAGAACATWHTGTTC |
|
|
|
