Information for 12-CTTGACACCTTTG (Motif 19)

A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C T G A C G T A G T C C G T A C G T A A C T G
p-value:1e-7
log p-value:-1.661e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.5 +/- 14.7bp
Average Position of motif in Background75.2 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX2/MA0688.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CTTGACACCTTTG
TTTCACACCTN--
 A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CTTGACACCTTTG
CTTCACACCTA--
 A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CTTGACACCTTTG
--TGACACCT---
 A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CTTGACACCTTTG
-TTCACACCTT--
 A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CTTGACACCTTTG-
ATAAATGACACCTATCA
 A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTTGACACCTTTG
KTTCACACCT---
 A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTTGACACCTTTG
-TTMACACCTT--
 A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTTGACACCTTTG
--TCACACCT---
 A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTTGACACCTTTG
NTTTTCACACCTT--
 A C G T A C G T A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTTGACACCTTTG
--TCACACCT---
 A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T