Information for 6-TTRAGCCTGGATTCTG (Motif 8)

A C G T C G A T C T G A C T G A A C T G A G T C G T A C A C G T A C T G A C T G C G T A A C G T G A C T A G T C A G C T C T A G
Reverse Opposite:
A G T C C T G A A C T G C G T A C G T A C G A T A G T C G T A C C G T A A C T G A C T G A G T C G A C T A G C T G C T A G T C A
p-value:1e-11
log p-value:-2.757e+01
Information Content per bp:1.770
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 32.9bp
Average Position of motif in Background35.3 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTRAGCCTGGATTCTG-
--TACCCTAGTTACCGA
 A C G T C G A T C T G A C T G A A C T G A G T C G T A C A C G T A C T G A C T G C G T A A C G T G A C T A G T C A G C T C T A G A C G T
A C G T A C G T G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PB0158.1_Rfx3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTRAGCCTGGATTCTG-----
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T C G A T C T G A C T G A A C T G A G T C G T A C A C G T A C T G A C T G C G T A A C G T G A C T A G T C A G C T C T A G A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTRAGCCTGGATTCTG
--AGGCCTNG------
 A C G T C G A T C T G A C T G A A C T G A G T C G T A C A C G T A C T G A C T G C G T A A C G T G A C T A G T C A G C T C T A G
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTRAGCCTGGATTCTG
--AGGCCTAG------
 A C G T C G A T C T G A C T G A A C T G A G T C G T A C A C G T A C T G A C T G C G T A A C G T G A C T A G T C A G C T C T A G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTRAGCCTGGATTCTG---
--CTACTTGGATACGGAAT
 A C G T C G A T C T G A C T G A A C T G A G T C G T A C A C G T A C T G A C T G C G T A A C G T G A C T A G T C A G C T C T A G A C G T A C G T A C G T
A C G T A C G T A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTRAGCCTGGATTCTG---
----GYCTGGYYTNTGTCA
 A C G T C G A T C T G A C T G A A C T G A G T C G T A C A C G T A C T G A C T G C G T A A C G T G A C T A G T C A G C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTRAGCCTGGATTCTG
NNTNNTGTCTGGNNTNG-
 A C G T A C G T A C G T C G A T C T G A C T G A A C T G A G T C G T A C A C G T A C T G A C T G C G T A A C G T G A C T A G T C A G C T C T A G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TTRAGCCTGGATTCTG
---GGTCTGGCAT---
 A C G T C G A T C T G A C T G A A C T G A G T C G T A C A C G T A C T G A C T G C G T A A C G T G A C T A G T C A G C T C T A G
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TTRAGCCTGGATTCTG
--TTGCCCGGATTAGG
 A C G T C G A T C T G A C T G A A C T G A G T C G T A C A C G T A C T G A C T G C G T A A C G T G A C T A G T C A G C T C T A G
A C G T A C G T C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TTRAGCCTGGATTCTG
----GCAGTGATTT--
 A C G T C G A T C T G A C T G A A C T G A G T C G T A C A C G T A C T G A C T G C G T A A C G T G A C T A G T C A G C T C T A G
A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T