Information for 9-AATCCCCCAT (Motif 35)

C G T A C G T A A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G A C T G A C T G A C T G C G T A A C G T A C G T
p-value:1e-6
log p-value:-1.436e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets80.3 +/- 4.5bp
Average Position of motif in Background43.0 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0122.1_Obox2/Jaspar

Match Rank:1
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------AATCCCCCAT-
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

PH0139.1_Pitx3/Jaspar

Match Rank:2
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------AATCCCCCAT
GNNAGCTAATCCCCCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AATCCCCCAT----
AGGAGACCCCCAATTTG
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

PH0123.1_Obox3/Jaspar

Match Rank:4
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------AATCCCCCAT-
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AATCCCCCAT
--TCCCCA--
 C G T A C G T A A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T
A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----AATCCCCCAT-
AGGCTAATCCCCAANG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PH0121.1_Obox1/Jaspar

Match Rank:7
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------AATCCCCCAT-
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0124.1_Obox5_1/Jaspar

Match Rank:8
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------AATCCCCCAT
NANANTTAATCCCNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

YY2/MA0748.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AATCCCCCAT--
-GTCCGCCATTA
 C G T A C G T A A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C G T
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AATCCCCCAT
CTTAATCCC----
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T