Information for 2-GGAGTSACTYCACWGA (Motif 3)

T A C G T C A G C T G A C A T G A C G T A T G C C G T A A G T C C G A T G A C T A G T C G C T A A T G C C G A T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A T C G C A G T T C A G C T G A C G T A C T A G C G A T A T C G G T C A G T A C A G C T A G T C A T G C
p-value:1e-13
log p-value:-3.171e+01
Information Content per bp:1.744
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.7 +/- 20.2bp
Average Position of motif in Background22.1 +/- 5.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GGAGTSACTYCACWGA----
-----NANTTCATTGAATTA
 T A C G T C A G C T G A C A T G A C G T A T G C C G T A A G T C C G A T G A C T A G T C G C T A A T G C C G A T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGAGTSACTYCACWGA
----SSAATCCACANN
 T A C G T C A G C T G A C A T G A C G T A T G C C G T A A G T C C G A T G A C T A G T C G C T A A T G C C G A T A C T G C T G A
A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGAGTSACTYCACWGA
---TCCAATCCACA--
 T A C G T C A G C T G A C A T G A C G T A T G C C G T A A G T C C G A T G A C T A G T C G C T A A T G C C G A T A C T G C T G A
A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GGAGTSACTYCACWGA
-------ATCCAC---
 T A C G T C A G C T G A C A T G A C G T A T G C C G T A A G T C C G A T G A C T A G T C G C T A A T G C C G A T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGAGTSACTYCACWGA
---GTGACGTCACCG-
 T A C G T C A G C T G A C A T G A C G T A T G C C G T A A G T C C G A T G A C T A G T C G C T A A T G C C G A T A C T G C T G A
A C G T A C G T A C G T T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGAGTSACTYCACWGA
---NSCACTYVAV---
 T A C G T C A G C T G A C A T G A C G T A T G C C G T A A G T C C G A T G A C T A G T C G C T A A T G C C G A T A C T G C T G A
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGAGTSACTYCACWGA
---ATCACCCCAT---
 T A C G T C A G C T G A C A T G A C G T A T G C C G T A A G T C C G A T G A C T A G T C G C T A A T G C C G A T A C T G C T G A
A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GGAGTSACTYCACWGA-
------ATTTCCAAGAA
 T A C G T C A G C T G A C A T G A C G T A T G C C G T A A G T C C G A T G A C T A G T C G C T A A T G C C G A T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGAGTSACTYCACWGA
-CNGTCACGCCAC---
 T A C G T C A G C T G A C A T G A C G T A T G C C G T A A G T C C G A T G A C T A G T C G C T A A T G C C G A T A C T G C T G A
A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GGAGTSACTYCACWGA
---ATCACCCCAC---
 T A C G T C A G C T G A C A T G A C G T A T G C C G T A A G T C C G A T G A C T A G T C G C T A A T G C C G A T A C T G C T G A
A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T