Information for 6-CTGGTGGCAT (Motif 29)

G T A C C G A T C A T G T A C G G C A T C T A G T C A G A G T C C T G A A G C T
Reverse Opposite:
C T G A A G C T C T A G A G T C G A T C C G T A A T G C G T A C C G T A A C T G
p-value:1e-8
log p-value:-1.988e+01
Information Content per bp:1.734
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif295.5
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets41.3 +/- 22.9bp
Average Position of motif in Background51.1 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTGGTGGCAT
-GGTTGGCAT
 G T A C C G A T C A T G T A C G G C A T C T A G T C A G A G T C C T G A A G C T
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTGGTGGCAT---
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T G T A C C G A T C A T G T A C G G C A T C T A G T C A G A G T C C T G A A G C T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGGTGGCAT
NNCAGGTGNN--
 A C G T A C G T G T A C C G A T C A T G T A C G G C A T C T A G T C A G A G T C C T G A A G C T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTGGTGGCAT
AACAGGTGNT--
 A C G T A C G T G T A C C G A T C A T G T A C G G C A T C T A G T C A G A G T C C T G A A G C T
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTGGTGGCAT----
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T G T A C C G A T C A T G T A C G G C A T C T A G T C A G A G T C C T G A A G C T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGGTGGCAT
-AGGTGTCA-
 G T A C C G A T C A T G T A C G G C A T C T A G T C A G A G T C C T G A A G C T
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGGTGGCAT
-NGTGGGCAT
 G T A C C G A T C A T G T A C G G C A T C T A G T C A G A G T C C T G A A G C T
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGGTGGCAT--
--CCWGGAATGY
 G T A C C G A T C A T G T A C G G C A T C T A G T C A G A G T C C T G A A G C T A C G T A C G T
A C G T A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTGGTGGCAT
AACAGATGGC--
 A C G T A C G T G T A C C G A T C A T G T A C G G C A T C T A G T C A G A G T C C T G A A G C T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTGGCAT--
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T G T A C C G A T C A T G T A C G G C A T C T A G T C A G A G T C C T G A A G C T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T