Information for 13-GCCWMAAYTCCAA (Motif 23)

C T A G T A G C G T A C G C A T T G A C C T G A C G T A A G T C A G C T A T G C G T A C T G C A G T C A
Reverse Opposite:
C A G T A C G T A C T G A T C G C T G A T C A G C G A T A G C T A C T G C G T A A C T G A T C G A G T C
p-value:1e-9
log p-value:-2.086e+01
Information Content per bp:1.642
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif512.8
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets51.6 +/- 28.3bp
Average Position of motif in Background50.8 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCCWMAAYTCCAA---
GGCAAAAGTCCAATAA
 C T A G T A G C G T A C G C A T T G A C C T G A C G T A A G T C A G C T A T G C G T A C T G C A G T C A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCWMAAYTCCAA
ACTACAATTCCC-
 C T A G T A G C G T A C G C A T T G A C C T G A C G T A A G T C A G C T A T G C G T A C T G C A G T C A
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCCWMAAYTCCAA-
----GCATTCCAGN
 C T A G T A G C G T A C G C A T T G A C C T G A C G T A A G T C A G C T A T G C G T A C T G C A G T C A A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCCWMAAYTCCAA
GGCCATAAATCA--
 A C G T C T A G T A G C G T A C G C A T T G A C C T G A C G T A A G T C A G C T A T G C G T A C T G C A G T C A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCCWMAAYTCCAA--
GAAAAAATTGCAAGG
 C T A G T A G C G T A C G C A T T G A C C T G A C G T A A G T C A G C T A T G C G T A C T G C A G T C A A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCCWMAAYTCCAA
---CACATTCCAT
 C T A G T A G C G T A C G C A T T G A C C T G A C G T A A G T C A G C T A T G C G T A C T G C A G T C A
A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

Hnf4a/MA0114.3/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCCWMAAYTCCAA-
GGGGTCAAAGTCCAAT
 A C G T A C G T C T A G T A G C G T A C G C A T T G A C C T G A C G T A A G T C A G C T A T G C G T A C T G C A G T C A A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCCWMAAYTCCAA------
RACTACAACTCCCAGVAKGC
 A C G T C T A G T A G C G T A C G C A T T G A C C T G A C G T A A G T C A G C T A T G C G T A C T G C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCCWMAAYTCCAA
---AAAAGTCAA-
 C T A G T A G C G T A C G C A T T G A C C T G A C G T A A G T C A G C T A T G C G T A C T G C A G T C A
A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCCWMAAYTCCAA-
----RCATTCCWGG
 C T A G T A G C G T A C G C A T T G A C C T G A C G T A A G T C A G C T A T G C G T A C T G C A G T C A A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G