Information for 3-GGCAGTAGTA (Motif 20)

A C T G C T A G A G T C C G T A A C T G C G A T C T G A A C T G A G C T C T G A
Reverse Opposite:
A G C T C T G A G T A C A G C T C G T A A G T C A C G T A C T G A G T C G T A C
p-value:1e-9
log p-value:-2.211e+01
Information Content per bp:1.863
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif46.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets45.6 +/- 25.2bp
Average Position of motif in Background49.7 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGCAGTAGTA---
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A A C T G C G A T C T G A A C T G A G C T C T G A A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGTAGTA--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A A C T G C G A T C T G A A C T G A G C T C T G A A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGTAGTA
TGGCAGTTGN-
 A C G T A C T G C T A G A G T C C G T A A C T G C G A T C T G A A C T G A G C T C T G A
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGCAGTAGTA---
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A A C T G C G A T C T G A A C T G A G C T C T G A A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGTAGTA--
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A A C T G C G A T C T G A A C T G A G C T C T G A A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCAGTAGTA
TGGCAGTTGG-
 A C G T A C T G C T A G A G T C C G T A A C T G C G A T C T G A A C T G A G C T C T G A
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCAGTAGTA
GGCVGTTR--
 A C T G C T A G A G T C C G T A A C T G C G A T C T G A A C T G A G C T C T G A
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCAGTAGTA---
ADGGYAGYAGCATCT
 A C G T A C G T A C T G C T A G A G T C C G T A A C T G C G A T C T G A A C T G A G C T C T G A A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGCAGTAGTA--
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A A C T G C G A T C T G A A C T G A G C T C T G A A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGTAGTA
TNNGGGCAG-----
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A A C T G C G A T C T G A A C T G A G C T C T G A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T