Information for 11-VTGGRGCCAGGAGCCT (Motif 17)

T A C G A C G T A C T G C T A G C T A G A C T G A G T C A G T C G T C A A C T G A T C G T G C A A C T G G T A C T G A C G A C T
Reverse Opposite:
C T G A A C T G A C T G A G T C A C G T A T G C A G T C A C G T A C T G A C T G A G T C A G T C A G T C A G T C T G C A A T G C
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.772
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.8 +/- 25.5bp
Average Position of motif in Background47.2 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---VTGGRGCCAGGAGCCT
AGCTCGGCGCCAAAAGC--
 A C G T A C G T A C G T T A C G A C G T A C T G C T A G C T A G A C T G A G T C A G T C G T C A A C T G A T C G T G C A A C T G G T A C T G A C G A C T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:VTGGRGCCAGGAGCCT
--CGTGCCAAG-----
 T A C G A C G T A C T G C T A G C T A G A C T G A G T C A G T C G T C A A C T G A T C G T G C A A C T G G T A C T G A C G A C T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:VTGGRGCCAGGAGCCT-
---GTGCCACGCGACTG
 T A C G A C G T A C T G C T A G C T A G A C T G A G T C A G T C G T C A A C T G A T C G T G C A A C T G G T A C T G A C G A C T A C G T
A C G T A C G T A C G T A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:VTGGRGCCAGGAGCCT
---NNVVCAGCTGBN-
 T A C G A C G T A C T G C T A G C T A G A C T G A G T C A G T C G T C A A C T G A T C G T G C A A C T G G T A C T G A C G A C T
A C G T A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:VTGGRGCCAGGAGCCT
-----GACAGGTGTN-
 T A C G A C G T A C T G C T A G C T A G A C T G A G T C A G T C G T C A A C T G A T C G T G C A A C T G G T A C T G A C G A C T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:VTGGRGCCAGGAGCCT
----TGCCAA------
 T A C G A C G T A C T G C T A G C T A G A C T G A G T C A G T C G T C A A C T G A T C G T G C A A C T G G T A C T G A C G A C T
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---VTGGRGCCAGGAGCCT
CCTTCGGCGCCAAAAGG--
 A C G T A C G T A C G T T A C G A C G T A C T G C T A G C T A G A C T G A G T C A G T C G T C A A C T G A T C G T G C A A C T G G T A C T G A C G A C T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:VTGGRGCCAGGAGCCT
-----NNCAGGTGCG-
 T A C G A C G T A C T G C T A G C T A G A C T G A G T C A G T C G T C A A C T G A T C G T G C A A C T G G T A C T G A C G A C T
A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:VTGGRGCCAGGAGCCT
-----NNCAGGTGNN-
 T A C G A C G T A C T G C T A G C T A G A C T G A G T C A G T C G T C A A C T G A T C G T G C A A C T G G T A C T G A C G A C T
A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:VTGGRGCCAGGAGCCT
--NGNGACAGCTGCN-
 T A C G A C G T A C T G C T A G C T A G A C T G A G T C A G T C G T C A A C T G A T C G T G C A A C T G G T A C T G A C G A C T
A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T