Information for 1-AGCTCCMTCYTCTGTG (Motif 2)

C G T A A C T G A T G C A C G T A G T C A G T C G T A C A C G T G T A C A G T C C G A T A T G C A G C T A T C G C A G T A T C G
Reverse Opposite:
A T G C G C T A A T G C C T G A A T C G G C T A C T A G A C T G G T C A A C G T A C T G A C T G C G T A A T C G G T A C G C A T
p-value:1e-14
log p-value:-3.333e+01
Information Content per bp:1.742
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 25.2bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGCTCCMTCYTCTGTG
-GCTCCG---------
 C G T A A C T G A T G C A C G T A G T C A G T C G T A C A C G T G T A C A G T C C G A T A T G C A G C T A T C G C A G T A T C G
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCTCCMTCYTCTGTG
GGCTCYAKCAYC----
 C G T A A C T G A T G C A C G T A G T C A G T C G T A C A C G T G T A C A G T C C G A T A T G C A G C T A T C G C A G T A T C G
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGCTCCMTCYTCTGTG
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C G T A A C T G A T G C A C G T A G T C A G T C G T A C A C G T G T A C A G T C C G A T A T G C A G C T A T C G C A G T A T C G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCCMTCYTCTGTG--
TAGCGCCCCCTGGTGGCCA
 A C G T C G T A A C T G A T G C A C G T A G T C A G T C G T A C A C G T G T A C A G T C C G A T A T G C A G C T A T C G C A G T A T C G A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGCTCCMTCYTCTGTG
-GCTCCGCCCMCY---
 C G T A A C T G A T G C A C G T A G T C A G T C G T A C A C G T G T A C A G T C C G A T A T G C A G C T A T C G C A G T A T C G
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCTCCMTCYTCTGTG--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T C G T A A C T G A T G C A C G T A G T C A G T C G T A C A C G T G T A C A G T C C G A T A T G C A G C T A T C G C A G T A T C G A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCCMTCYTCTGTG
NNGCACCTTTCTCC---
 A C G T C G T A A C T G A T G C A C G T A G T C A G T C G T A C A C G T G T A C A G T C C G A T A T G C A G C T A T C G C A G T A T C G
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGCTCCMTCYTCTGTG
NCTTCCCGCCC-----
 C G T A A C T G A T G C A C G T A G T C A G T C G T A C A C G T G T A C A G T C C G A T A T G C A G C T A T C G C A G T A T C G
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGCTCCMTCYTCTGTG
CNGTCCTCCC---------
 A C G T A C G T A C G T C G T A A C T G A T G C A C G T A G T C A G T C G T A C A C G T G T A C A G T C C G A T A T G C A G C T A T C G C A G T A T C G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGCTCCMTCYTCTGTG
--GACCCCCCGCTGTG
 C G T A A C T G A T G C A C G T A G T C A G T C G T A C A C G T G T A C A G T C C G A T A T G C A G C T A T C G C A G T A T C G
A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G