Information for 9-GCATCCAGACAGC (Motif 20)

T A C G T A G C T G C A A C G T T A G C T G A C G C T A T A C G T C G A T A G C G T C A A T C G T A G C
Reverse Opposite:
A T C G T A G C C A G T A T C G A G C T A T G C C G A T A C T G A T C G T G C A A C G T A T C G A T G C
p-value:1e-9
log p-value:-2.099e+01
Information Content per bp:1.412
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets68.8 +/- 20.6bp
Average Position of motif in Background54.3 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.79
Offset:4
Orientation:reverse strand
Alignment:GCATCCAGACAGC
----CCAGACAG-
 T A C G T A G C T G C A A C G T T A G C T G A C G C T A T A C G T C G A T A G C G T C A A T C G T A G C
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GCATCCAGACAGC---
CAAATCCAGACATCACA
 A C G T T A C G T A G C T G C A A C G T T A G C T G A C G C T A T A C G T C G A T A G C G T C A A T C G T A G C A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:GCATCCAGACAGC-
----CCAGACRSVB
 T A C G T A G C T G C A A C G T T A G C T G A C G C T A T A C G T C G A T A G C G T C A A T C G T A G C A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GCATCCAGACAGC
----BCAGACWA-
 T A C G T A G C T G C A A C G T T A G C T G A C G C T A T A C G T C G A T A G C G T C A A T C G T A G C
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCATCCAGACAGC
-ATGCCAGACN--
 T A C G T A G C T G C A A C G T T A G C T G A C G C T A T A C G T C G A T A G C G T C A A T C G T A G C
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCATCCAGACAGC
TGGCAGNCTGCCAG-
 A C G T A C G T T A C G T A G C T G C A A C G T T A G C T G A C G C T A T A C G T C G A T A G C G T C A A T C G T A G C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCATCCAGACAGC
CGCCCCCTGACA--
 A C G T T A C G T A G C T G C A A C G T T A G C T G A C G C T A T A C G T C G A T A G C G T C A A T C G T A G C
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCATCCAGACAGC
-CRCCCACGCA--
 T A C G T A G C T G C A A C G T T A G C T G A C G C T A T A C G T C G A T A G C G T C A A T C G T A G C
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCATCCAGACAGC
AGGTGNCAGACAG-
 A C G T T A C G T A G C T G C A A C G T T A G C T G A C G C T A T A C G T C G A T A G C G T C A A T C G T A G C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCATCCAGACAGC
-CGTCTAGACA--
 T A C G T A G C T G C A A C G T T A G C T G A C G C T A T A C G T C G A T A G C G T C A A T C G T A G C
A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T