Information for 6-CCCTCTTVTGGCC (Motif 14)

G A T C G T A C A G T C A G C T A G T C A C G T C A G T T G C A C G A T A C T G A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C A G T C C G T A A C G T G T C A C G T A A C T G C T G A A C T G A C T G C A T G
p-value:1e-10
log p-value:-2.334e+01
Information Content per bp:1.824
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.7 +/- 24.9bp
Average Position of motif in Background63.1 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTCTTVTGGCC-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T G A T C G T A C A G T C A G C T A G T C A C G T C A G T T G C A C G A T A C T G A C T G A G T C A T G C A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------CCCTCTTVTGGCC-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C A G T C A G C T A G T C A C G T C A G T T G C A C G A T A C T G A C T G A G T C A T G C A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.74
Offset:-8
Orientation:forward strand
Alignment:--------CCCTCTTVTGGCC
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C A G T C A G C T A G T C A C G T C A G T T G C A C G A T A C T G A C T G A G T C A T G C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTTVTGGCC
TGWCCTCARNTGACC
 A C G T A C G T G A T C G T A C A G T C A G C T A G T C A C G T C A G T T G C A C G A T A C T G A C T G A G T C A T G C
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCCTCTTVTGGCC--
-CCCCCTTGGGCCCC
 G A T C G T A C A G T C A G C T A G T C A C G T C A G T T G C A C G A T A C T G A C T G A G T C A T G C A C G T A C G T
A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTTVTGGCC--
TGACCTTTCGTGACCTT
 A C G T A C G T G A T C G T A C A G T C A G C T A G T C A C G T C A G T T G C A C G A T A C T G A C T G A G T C A T G C A C G T A C G T
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCCTCTTVTGGCC
-CCATATATGGNA
 G A T C G T A C A G T C A G C T A G T C A C G T C A G T T G C A C G A T A C T G A C T G A G T C A T G C
A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCCTCTTVTGGCC
-CCTTTTATAGNC
 G A T C G T A C A G T C A G C T A G T C A C G T C A G T T G C A C G A T A C T G A C T G A G T C A T G C
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CCCTCTTVTGGCC
-------TTGGCA
 G A T C G T A C A G T C A G C T A G T C A C G T C A G T T G C A C G A T A C T G A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCCTCTTVTGGCC--
------NTTGGCANN
 G A T C G T A C A G T C A G C T A G T C A C G T C A G T T G C A C G A T A C T G A C T G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G