Information for 4-CTTGGCCGTA (Motif 6)

A T G C A C G T A C G T C T A G A C T G A G T C G T A C A T C G A G C T T C G A
Reverse Opposite:
A C G T T C G A A T G C C A T G A C T G A G T C A G T C G T C A C G T A A T C G
p-value:1e-12
log p-value:-2.893e+01
Information Content per bp:1.850
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif63.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets54.4 +/- 20.0bp
Average Position of motif in Background57.7 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTTGGCCGTA
-TTGGCA---
 A T G C A C G T A C G T C T A G A C T G A G T C G T A C A T C G A G C T T C G A
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTTGGCCGTA
NTTGGCANN-
 A T G C A C G T A C G T C T A G A C T G A G T C G T A C A T C G A G C T T C G A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTTGGCCGTA-----
NNNTNGGGCGTATNNTN
 A C G T A C G T A T G C A C G T A C G T C T A G A C T G A G T C G T A C A T C G A G C T T C G A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTTGGCCGTA
CTAGGCCT--
 A T G C A C G T A C G T C T A G A C T G A G T C G T A C A T C G A G C T T C G A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTTGGCCGTA
NNTTGGCANN-
 A C G T A T G C A C G T A C G T C T A G A C T G A G T C G T A C A T C G A G C T T C G A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTGGCCGTA
CTTGGCAA--
 A T G C A C G T A C G T C T A G A C T G A G T C G T A C A T C G A G C T T C G A
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTGGCCGTA------
TCTTTGGCGTACCCTAA
 A C G T A T G C A C G T A C G T C T A G A C T G A G T C G T A C A T C G A G C T T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTTGGCCGTA
CCGATTGGCT---
 A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C T G A G T C G T A C A T C G A G C T T C G A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTTGGCCGTA-
---GGCVGTTR
 A T G C A C G T A C G T C T A G A C T G A G T C G T A C A T C G A G C T T C G A A C G T
A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

PB0032.1_IRC900814_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTTGGCCGTA---
GNNATTTGTCGTAANN
 A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C T G A G T C G T A C A T C G A G C T T C G A A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T