Information for 16-CGGCGGCGCCGCC (Motif 22)

A G T C A C T G A T C G A G T C A C T G A T C G A G T C A C T G A G T C G T A C A C T G T A G C A G T C
Reverse Opposite:
A C T G A C T G G T A C A C T G A C T G A G T C A C T G A T G C A G T C A C T G A T G C A G T C A C T G
p-value:1e-4
log p-value:-1.133e+01
Information Content per bp:1.896
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.6 +/- 19.8bp
Average Position of motif in Background37.7 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGGCGGCGCCGCC
GGGGGCGGGGCC---
 A C G T A C G T A G T C A C T G A T C G A G T C A C T G A T C G A G T C A C T G A G T C G T A C A C T G T A G C A G T C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGCGGCGCCGCC
GCGCCTGCGCA---
 A C G T A G T C A C T G A T C G A G T C A C T G A T C G A G T C A C T G A G T C G T A C A C T G T A G C A G T C
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGCGGCGCCGCC-
AAGGKGRCGCAGGCA
 A C G T A G T C A C T G A T C G A G T C A C T G A T C G A G T C A C T G A G T C G T A C A C T G T A G C A G T C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGGCGGCGCCGCC---
CCTTCGGCGCCAAAAGG
 A C G T A G T C A C T G A T C G A G T C A C T G A T C G A G T C A C T G A G T C G T A C A C T G T A G C A G T C A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGGCGGCGCCGCC--
TTGGGGGCGCCCCTAG
 A C G T A G T C A C T G A T C G A G T C A C T G A T C G A G T C A C T G A G T C G T A C A C T G T A G C A G T C A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGGCGGCGCCGCC
RGKGGGCGGAGC----
 A C G T A C G T A C G T A G T C A C T G A T C G A G T C A C T G A T C G A G T C A C T G A G T C G T A C A C T G T A G C A G T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGGCGGCGCCGCC
GCGCATGCGCAG--
 A C G T A G T C A C T G A T C G A G T C A C T G A T C G A G T C A C T G A G T C G T A C A C T G T A G C A G T C
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGGCGGCGCCGCC---
AGCTCGGCGCCAAAAGC
 A C G T A G T C A C T G A T C G A G T C A C T G A T C G A G T C A C T G A G T C G T A C A C T G T A G C A G T C A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CGGCGGCGCCGCC
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T A G T C A C T G A T C G A G T C A C T G A T C G A G T C A C T G A G T C G T A C A C T G T A G C A G T C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGGCGGCGCCGCC
--AGCGCGCC---
 A G T C A C T G A T C G A G T C A C T G A T C G A G T C A C T G A G T C G T A C A C T G T A G C A G T C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T