Information for 12-TGTGTTTCAA (Motif 16)

A C G T A C T G A C G T C T A G A C G T A G C T A G C T G T A C G C T A C T G A
Reverse Opposite:
A G C T C G A T A C T G C T G A C T G A G T C A A G T C G T C A A G T C G T C A
p-value:1e-8
log p-value:-2.042e+01
Information Content per bp:1.849
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif82.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets59.4 +/- 25.7bp
Average Position of motif in Background47.9 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGTGTTTCAA
NATGTTGCAA
 A C G T A C T G A C G T C T A G A C G T A G C T A G C T G T A C G C T A C T G A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGTGTTTCAA-
-CGGTTTCAAA
 A C G T A C T G A C G T C T A G A C G T A G C T A G C T G T A C G C T A C T G A A C G T
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGTGTTTCAA
GCTGTGGTTT--
 A C G T A C G T A C G T A C T G A C G T C T A G A C G T A G C T A G C T G T A C G C T A C T G A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTTTCAA
NNTGTGGTTT--
 A C G T A C G T A C G T A C T G A C G T C T A G A C G T A G C T A G C T G T A C G C T A C T G A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGTGTTTCAA
GTCTGTGGTTT--
 A C G T A C G T A C G T A C G T A C T G A C G T C T A G A C G T A G C T A G C T G T A C G C T A C T G A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTTTCAA
NNHTGTGGTTWN-
 A C G T A C G T A C G T A C G T A C T G A C G T C T A G A C G T A G C T A G C T G T A C G C T A C T G A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTTTCAA
CTGTGGTTTN-
 A C G T A C G T A C T G A C G T C T A G A C G T A G C T A G C T G T A C G C T A C T G A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGTGTTTCAA-
-TGGTTTCAGT
 A C G T A C T G A C G T C T A G A C G T A G C T A G C T G T A C G C T A C T G A A C G T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGTGTTTCAA---
-NTGTTTAYATWW
 A C G T A C T G A C G T C T A G A C G T A G C T A G C T G T A C G C T A C T G A A C G T A C G T A C G T
A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTTTCAA----
CTTTGTTTACTTTTN
 A C G T A C G T A C T G A C G T C T A G A C G T A G C T A G C T G T A C G C T A C T G A A C G T A C G T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G