Information for 9-CAGTGGACAGCTC (Motif 12)

A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C A C G T A C T G C G A T A G T C A G T C G T C A A G T C G A C T A C T G
p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.4 +/- 15.2bp
Average Position of motif in Background41.0 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CAGTGGACAGCTC-
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PH0170.1_Tgif2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAGTGGACAGCTC---
GTATTGACAGCTNNTT
 A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGTGGACAGCTC---
NTATTGACAGCTNNTT
 A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGTGGACAGCTC---
NTATTGACAGGTNNTN
 A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGTGGACAGCTC---
GGATTGACAGGTCNTT
 A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

REST/MA0138.2/Jaspar

Match Rank:6
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CAGTGGACAGCTC-
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CAGTGGACAGCTC---
-----GACAGCTGCAG
 A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CAGTGGACAGCTC---
-----AACAGCTGCAG
 A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAGTGGACAGCTC
---TTGACAGC--
 A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CAGTGGACAGCTC
-----AACAGCTG
 A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G