Information for 12-GCGCTTGCCCTTA (Motif 14)

A T C G A G T C A C T G A T G C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T G T C A
Reverse Opposite:
A C G T G T C A C G T A A C T G A C T G A C T G A G T C C G T A C G T A A T C G T A G C A C T G A T G C
p-value:1e-8
log p-value:-2.055e+01
Information Content per bp:1.927
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.7 +/- 20.9bp
Average Position of motif in Background57.2 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GCGCTTGCCCTTA
----CTGCCCGCA
 A T C G A G T C A C T G A T G C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T G T C A
A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCGCTTGCCCTTA
GCGCCTGCGCA--
 A T C G A G T C A C T G A T G C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T G T C A
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCGCTTGCCCTTA
CTGCGCATGCGC---
 A C G T A C G T A T C G A G T C A C T G A T G C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T G T C A
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCGCTTGCCCTTA
GTGCGCATGCGC---
 A C G T A C G T A T C G A G T C A C T G A T G C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T G T C A
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCGCTTGCCCTTA-
-CNNTTGACCTTTG
 A T C G A G T C A C T G A T G C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T G T C A A C G T
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCGCTTGCCCTTA
NNACTTGCCTT--
 A T C G A G T C A C T G A T G C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T G T C A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCGCTTGCCCTTA
---BNTGDCCTTG
 A T C G A G T C A C T G A T G C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T G T C A
A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCGCTTGCCCTTA
-----TGACCTYA
 A T C G A G T C A C T G A T G C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T G T C A
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTTGCCCTTA
TGACCTTGACCT--
 A C G T A T C G A G T C A C T G A T G C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T G T C A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTTGCCCTTA
TGACCTTGACCT--
 A C G T A T C G A G T C A C T G A T G C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T G T C A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T