Information for 9-TSSCCWGTCTGTGGCA (Motif 10)

A C G T T A G C A T C G A G T C A G T C C G A T A C T G A G C T A G T C A G C T A C T G C A G T A C T G A C T G A G T C T C G A
Reverse Opposite:
A C G T A C T G G T A C A G T C G C T A G T A C C T G A A C T G T C G A A G T C C G T A A C T G A C T G A T G C A T C G T G C A
p-value:1e-10
log p-value:-2.355e+01
Information Content per bp:1.770
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 23.3bp
Average Position of motif in Background57.0 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TSSCCWGTCTGTGGCA
-----TGCCTGAGGCN
 A C G T T A G C A T C G A G T C A G T C C G A T A C T G A G C T A G T C A G C T A C T G C A G T A C T G A C T G A G T C T C G A
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TSSCCWGTCTGTGGCA
-----NGCCTNAGGCN
 A C G T T A G C A T C G A G T C A G T C C G A T A C T G A G C T A G T C A G C T A C T G C A G T A C T G A C T G A G T C T C G A
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TSSCCWGTCTGTGGCA
-----NGCCTGAGGCN
 A C G T T A G C A T C G A G T C A G T C C G A T A C T G A G C T A G T C A G C T A C T G C A G T A C T G A C T G A G T C T C G A
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TSSCCWGTCTGTGGCA--
---ATTGCCTGAGGCAAT
 A C G T T A G C A T C G A G T C A G T C C G A T A C T G A G C T A G T C A G C T A C T G C A G T A C T G A C T G A G T C T C G A A C G T A C G T
A C G T A C G T A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TSSCCWGTCTGTGGCA
-----TGGGTGTGGC-
 A C G T T A G C A T C G A G T C A G T C C G A T A C T G A G C T A G T C A G C T A C T G C A G T A C T G A C T G A G T C T C G A
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TSSCCWGTCTGTGGCA
----CTGTCTGG----
 A C G T T A G C A T C G A G T C A G T C C G A T A C T G A G C T A G T C A G C T A C T G C A G T A C T G A C T G A G T C T C G A
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TSSCCWGTCTGTGGCA--
---ANTGCCTGAGGCAAN
 A C G T T A G C A T C G A G T C A G T C C G A T A C T G A G C T A G T C A G C T A C T G C A G T A C T G A C T G A G T C T C G A A C G T A C G T
A C G T A C G T A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TSSCCWGTCTGTGGCA
--VBSYGTCTGG----
 A C G T T A G C A T C G A G T C A G T C C G A T A C T G A G C T A G T C A G C T A C T G C A G T A C T G A C T G A G T C T C G A
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TSSCCWGTCTGTGGCA
----NTGGGTGTGGCC
 A C G T T A G C A T C G A G T C A G T C C G A T A C T G A G C T A G T C A G C T A C T G C A G T A C T G A C T G A G T C T C G A
A C G T A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TSSCCWGTCTGTGGCA-
------GTCTGTGGTTT
 A C G T T A G C A T C G A G T C A G T C C G A T A C T G A G C T A G T C A G C T A C T G C A G T A C T G A C T G A G T C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T