Information for 6-TTGTTTTTGCAGCCTG (Motif 9)

A C G T A G C T A C T G A C G T A C G T A C G T A G C T A C G T A T C G G T A C C T G A A C T G G A T C T G A C C G A T A T C G
Reverse Opposite:
A T G C G C T A A C T G C T A G A G T C A G C T A C T G T A G C C G T A C T G A T G C A G T C A T G C A T A G C C T G A G T C A
p-value:1e-9
log p-value:-2.170e+01
Information Content per bp:1.780
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.2 +/- 21.1bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGTTTTTGCAGCCTG
CCATTGTTNY---------
 A C G T A C G T A C G T A C G T A G C T A C T G A C G T A C G T A C G T A G C T A C G T A T C G G T A C C T G A A C T G G A T C T G A C C G A T A T C G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTGTTTTTGCAGCCTG
ATTGTT-----------
 A C G T A C G T A G C T A C T G A C G T A C G T A C G T A G C T A C G T A T C G G T A C C T G A A C T G G A T C T G A C C G A T A T C G
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTTTTGCAGCCTG
ATTGTTTAN--------
 A C G T A C G T A G C T A C T G A C G T A C G T A C G T A G C T A C G T A T C G G T A C C T G A A C T G G A T C T G A C C G A T A T C G
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:4
Score:0.59
Offset:-10
Orientation:reverse strand
Alignment:----------TTGTTTTTGCAGCCTG
TNNANNTCTATTGTTNTNNANN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C G T A C G T A C G T A G C T A C G T A T C G G T A C C T G A A C T G G A T C T G A C C G A T A T C G
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T A C G T A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTTTTGCAGCCTG
GNATTTTTTTTTTGANC---
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C G T A C G T A C G T A G C T A C G T A T C G G T A C C T G A A C T G G A T C T G A C C G A T A T C G
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTTTTGCAGCCTG
NNNNTTTTTTTTTNAAC---
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C G T A C G T A C G T A G C T A C G T A T C G G T A C C T G A A C T G G A T C T G A C C G A T A T C G
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTGTTTTTGCAGCCTG
ATTGTTA----------
 A C G T A C G T A G C T A C T G A C G T A C G T A C G T A G C T A C G T A T C G G T A C C T G A A C T G G A T C T G A C C G A T A T C G
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TTGTTTTTGCAGCCTG
CNNNTATTGTTCNNNNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C G T A C G T A C G T A G C T A C G T A T C G G T A C C T G A A C T G G A T C T G A C C G A T A T C G
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A A C G T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGTTTTTGCAGCCTG
TTTTTTTTCNNGTN--
 A C G T A G C T A C T G A C G T A C G T A C G T A G C T A C G T A T C G G T A C C T G A A C T G G A T C T G A C C G A T A T C G
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGTTTTTGCAGCCTG
TTGTTTAC--------
 A C G T A G C T A C T G A C G T A C G T A C G T A G C T A C G T A T C G G T A C C T G A A C T G G A T C T G A C C G A T A T C G
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T