Information for 5-GCWGGTGTTA (Motif 4)

C A T G A G T C C G T A C A T G A C T G C G A T C T A G A C G T A C G T G C T A
Reverse Opposite:
C G A T G T C A C G T A G A T C G C T A A G T C G A T C C G A T C T A G G T A C
p-value:1e-14
log p-value:-3.259e+01
Information Content per bp:1.766
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.95%
Number of Background Sequences with motif167.1
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets50.0 +/- 24.7bp
Average Position of motif in Background49.2 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX4/MA0806.1/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GCWGGTGTTA
--AGGTGTGA
 C A T G A G T C C G T A C A T G A C T G C G A T C T A G A C G T A C G T G C T A
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A

TBX5/MA0807.1/Jaspar

Match Rank:2
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GCWGGTGTTA
--AGGTGTGA
 C A T G A G T C C G T A C A T G A C T G C G A T C T A G A C G T A C G T G C T A
A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

MGA/MA0801.1/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GCWGGTGTTA
--AGGTGTGA
 C A T G A G T C C G T A C A T G A C T G C G A T C T A G A C G T A C G T G C T A
A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GCWGGTGTTA
--AGGTGTGA
 C A T G A G T C C G T A C A T G A C T G C G A T C T A G A C G T A C G T G C T A
A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GCWGGTGTTA
NNCAGGTGTN-
 A C G T C A T G A G T C C G T A C A T G A C T G C G A T C T A G A C G T A C G T G C T A
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GCWGGTGTTA--
--AGGTGTTAAT
 C A T G A G T C C G T A C A T G A C T G C G A T C T A G A C G T A C G T G C T A A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

TBX15/MA0803.1/Jaspar

Match Rank:7
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GCWGGTGTTA
--AGGTGTGA
 C A T G A G T C C G T A C A T G A C T G C G A T C T A G A C G T A C G T G C T A
A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GCWGGTGTTA
AACAGGTGT--
 A C G T C A T G A G T C C G T A C A T G A C T G C G A T C T A G A C G T A C G T G C T A
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GCWGGTGTTA--
-AAGGTGTGAAA
 C A T G A G T C C G T A C A T G A C T G C G A T C T A G A C G T A C G T G C T A A C G T A C G T
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GCWGGTGTTA
--AGGTGTCA
 C A T G A G T C C G T A C A T G A C T G C G A T C T A G A C G T A C G T G C T A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A