Information for 11-CGGAAAGAGGCVA (Motif 13)

G T A C A C T G A C T G G T C A C G T A C T G A C T A G C T G A A C T G A C T G A G T C T A C G C T G A
Reverse Opposite:
A G C T A G T C A C T G A G T C G T A C A G C T A G T C A G C T A C G T A C G T A G T C A G T C A C T G
p-value:1e-10
log p-value:-2.422e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.0 +/- 30.8bp
Average Position of motif in Background47.3 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC3/MA0625.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAAGAGGCVA
AATGGAAAAT-----
 A C G T A C G T G T A C A C T G A C T G G T C A C G T A C T G A C T A G C T G A A C T G A C T G A G T C T A C G C T G A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAAGAGGCVA
NNTGGAAANN-----
 A C G T A C G T G T A C A C T G A C T G G T C A C G T A C T G A C T A G C T G A A C T G A C T G A G T C T A C G C T G A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGGAAAGAGGCVA
TAGGGCAAAGGTCA
 A C G T G T A C A C T G A C T G G T C A C G T A C T G A C T A G C T G A A C T G A C T G A G T C T A C G C T G A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGGAAAGAGGCVA
GTAGGGCAAAGGTCA
 A C G T A C G T G T A C A C T G A C T G G T C A C G T A C T G A C T A G C T G A A C T G A C T G A G T C T A C G C T G A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGGAAAGAGGCVA
TGGGGCAAAGGTCA
 A C G T G T A C A C T G A C T G G T C A C G T A C T G A C T A G C T G A A C T G A C T G A G T C T A C G C T G A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGAAAGAGGCVA----
GGGRAARRGRMCAGMTG
 G T A C A C T G A C T G G T C A C G T A C T G A C T A G C T G A A C T G A C T G A G T C T A C G C T G A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGAAAGAGGCVA-
TGGCACCATGCCAA
 G T A C A C T G A C T G G T C A C G T A C T G A C T A G C T G A A C T G A C T G A G T C T A C G C T G A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAAGAGGCVA
DCCGGAARYN-----
 A C G T A C G T G T A C A C T G A C T G G T C A C G T A C T G A C T A G C T G A A C T G A C T G A G T C T A C G C T G A
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CGGAAAGAGGCVA
NDCAGGAARTNN----
 A C G T A C G T A C G T G T A C A C T G A C T G G T C A C G T A C T G A C T A G C T G A A C T G A C T G A G T C T A C G C T G A
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGGAAAGAGGCVA
TGGAAAA------
 G T A C A C T G A C T G G T C A C G T A C T G A C T A G C T G A A C T G A C T G A G T C T A C G C T G A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T