Information for 9-GGCGCCAGAGTGC (Motif 11)

A C T G A C T G A G T C A T C G A G T C A G T C G T C A A C T G C G T A A C T G G A C T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C G T A G T C A C G T A C T G A C T G A T G C A C T G A G T C A G T C
p-value:1e-10
log p-value:-2.490e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 9.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1/MA0024.3/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGCGCCAGAGTGC
TTTGGCGCCAAA----
 A C G T A C G T A C G T A C T G A C T G A G T C A T C G A G T C A G T C G T C A A C T G C G T A A C T G G A C T A C T G A G T C
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCCAGAGTGC
CCTTCGGCGCCAAAAGG-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A T C G A G T C A G T C G T C A A C T G C G T A A C T G G A C T A C T G A G T C
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCCAGAGTGC
AGCTCGGCGCCAAAAGC-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A T C G A G T C A G T C G T C A A C T G C G T A A C T G G A C T A C T G A G T C
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGCGCCAGAGTGC--
-CCGCCCAAGGGCAG
 A C T G A C T G A G T C A T C G A G T C A G T C G T C A A C T G C G T A A C T G G A C T A C T G A G T C A C G T A C G T
A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCGCCAGAGTGC
-GAGSCCGAGC--
 A C T G A C T G A G T C A T C G A G T C A G T C G T C A A C T G C G T A A C T G G A C T A C T G A G T C
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGCGCCAGAGTGC--
----CTTGAGTGGCT
 A C T G A C T G A G T C A T C G A G T C A G T C G T C A A C T G C G T A A C T G G A C T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGCGCCAGAGTGC-------
GCCASCAGGGGGCGCYVNNG
 A C T G A C T G A G T C A T C G A G T C A G T C G T C A A C T G C G T A A C T G G A C T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGCGCCAGAGTGC--
---GCCTCAGGGCAT
 A C T G A C T G A G T C A T C G A G T C A G T C G T C A A C T G C G T A A C T G G A C T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCGCCAGAGTGC--
-TTGCCCTAGGGCAT
 A C T G A C T G A G T C A T C G A G T C A G T C G T C A A C T G C G T A A C T G G A C T A C T G A G T C A C G T A C G T
A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCGCCAGAGTGC
AGGTGNCAGACAG-
 A C G T A C T G A C T G A G T C A T C G A G T C A G T C G T C A A C T G C G T A A C T G G A C T A C T G A G T C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T