Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-160 | -3.687e+02 | 0.0000 | 148.0 | 17.72% | 294.0 | 0.62% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-125 | -2.884e+02 | 0.0000 | 159.0 | 19.04% | 644.8 | 1.37% | motif file (matrix) |
svg |
3 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-31 | -7.194e+01 | 0.0000 | 117.0 | 14.01% | 1852.9 | 3.94% | motif file (matrix) |
svg |
4 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-30 | -6.940e+01 | 0.0000 | 105.0 | 12.57% | 1560.2 | 3.32% | motif file (matrix) |
svg |
5 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-27 | -6.409e+01 | 0.0000 | 102.0 | 12.22% | 1581.8 | 3.36% | motif file (matrix) |
svg |
6 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-26 | -6.058e+01 | 0.0000 | 163.0 | 19.52% | 3688.9 | 7.84% | motif file (matrix) |
svg |
7 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-26 | -6.004e+01 | 0.0000 | 174.0 | 20.84% | 4115.9 | 8.75% | motif file (matrix) |
svg |
8 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-24 | -5.684e+01 | 0.0000 | 82.0 | 9.82% | 1165.6 | 2.48% | motif file (matrix) |
svg |
9 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-22 | -5.258e+01 | 0.0000 | 82.0 | 9.82% | 1247.8 | 2.65% | motif file (matrix) |
svg |
10 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-22 | -5.199e+01 | 0.0000 | 87.0 | 10.42% | 1403.4 | 2.98% | motif file (matrix) |
svg |
11 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-17 | -3.974e+01 | 0.0000 | 111.0 | 13.29% | 2538.5 | 5.39% | motif file (matrix) |
svg |
12 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-15 | -3.651e+01 | 0.0000 | 49.0 | 5.87% | 656.2 | 1.39% | motif file (matrix) |
svg |
13 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.493e+01 | 0.0000 | 56.0 | 6.71% | 876.2 | 1.86% | motif file (matrix) |
svg |
14 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-11 | -2.717e+01 | 0.0000 | 54.0 | 6.47% | 1000.7 | 2.13% | motif file (matrix) |
svg |
15 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-10 | -2.377e+01 | 0.0000 | 54.0 | 6.47% | 1097.8 | 2.33% | motif file (matrix) |
svg |
16 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-9 | -2.131e+01 | 0.0000 | 175.0 | 20.96% | 6240.1 | 13.26% | motif file (matrix) |
svg |
17 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-8 | -1.914e+01 | 0.0000 | 24.0 | 2.87% | 313.2 | 0.67% | motif file (matrix) |
svg |
18 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-8 | -1.912e+01 | 0.0000 | 210.0 | 25.15% | 8102.0 | 17.22% | motif file (matrix) |
svg |
19 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-7 | -1.784e+01 | 0.0000 | 27.0 | 3.23% | 417.2 | 0.89% | motif file (matrix) |
svg |
20 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-7 | -1.678e+01 | 0.0000 | 64.0 | 7.66% | 1730.0 | 3.68% | motif file (matrix) |
svg |
21 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.519e+01 | 0.0000 | 46.0 | 5.51% | 1120.4 | 2.38% | motif file (matrix) |
svg |
22 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-6 | -1.518e+01 | 0.0000 | 7.0 | 0.84% | 23.5 | 0.05% | motif file (matrix) |
svg |
23 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-6 | -1.501e+01 | 0.0000 | 50.0 | 5.99% | 1276.1 | 2.71% | motif file (matrix) |
svg |
24 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-6 | -1.500e+01 | 0.0000 | 104.0 | 12.46% | 3519.0 | 7.48% | motif file (matrix) |
svg |
25 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-6 | -1.394e+01 | 0.0000 | 15.0 | 1.80% | 174.8 | 0.37% | motif file (matrix) |
svg |
26 |
| E-box(bHLH)/Promoter/Homer | 1e-4 | -1.149e+01 | 0.0001 | 15.0 | 1.80% | 214.3 | 0.46% | motif file (matrix) |
svg |
27 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-4 | -1.142e+01 | 0.0001 | 6.0 | 0.72% | 27.2 | 0.06% | motif file (matrix) |
svg |
28 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-4 | -1.034e+01 | 0.0004 | 112.0 | 13.41% | 4300.4 | 9.14% | motif file (matrix) |
svg |
29 |
| ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer | 1e-4 | -9.386e+00 | 0.0011 | 126.0 | 15.09% | 5079.9 | 10.80% | motif file (matrix) |
svg |
30 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-3 | -8.894e+00 | 0.0017 | 21.0 | 2.51% | 467.9 | 0.99% | motif file (matrix) |
svg |
31 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-3 | -8.652e+00 | 0.0021 | 77.0 | 9.22% | 2835.0 | 6.03% | motif file (matrix) |
svg |
32 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-3 | -8.603e+00 | 0.0021 | 58.0 | 6.95% | 1981.0 | 4.21% | motif file (matrix) |
svg |
33 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-3 | -8.427e+00 | 0.0024 | 11.0 | 1.32% | 164.7 | 0.35% | motif file (matrix) |
svg |
34 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-3 | -8.231e+00 | 0.0029 | 88.0 | 10.54% | 3389.1 | 7.20% | motif file (matrix) |
svg |
35 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-3 | -8.101e+00 | 0.0032 | 42.0 | 5.03% | 1326.7 | 2.82% | motif file (matrix) |
svg |
36 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.810e+00 | 0.0041 | 46.0 | 5.51% | 1517.9 | 3.23% | motif file (matrix) |
svg |
37 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-3 | -7.551e+00 | 0.0052 | 13.0 | 1.56% | 243.8 | 0.52% | motif file (matrix) |
svg |
38 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.256e+00 | 0.0068 | 52.0 | 6.23% | 1824.8 | 3.88% | motif file (matrix) |
svg |
39 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.111e+00 | 0.0076 | 81.0 | 9.70% | 3180.5 | 6.76% | motif file (matrix) |
svg |
40 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-3 | -7.108e+00 | 0.0076 | 45.0 | 5.39% | 1526.7 | 3.24% | motif file (matrix) |
svg |
41 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -6.797e+00 | 0.0099 | 151.0 | 18.08% | 6689.0 | 14.22% | motif file (matrix) |
svg |
42 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -6.714e+00 | 0.0105 | 68.0 | 8.14% | 2609.6 | 5.55% | motif file (matrix) |
svg |
43 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.457e+00 | 0.0133 | 41.0 | 4.91% | 1401.1 | 2.98% | motif file (matrix) |
svg |
44 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-2 | -6.088e+00 | 0.0188 | 95.0 | 11.38% | 3986.4 | 8.47% | motif file (matrix) |
svg |
45 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -6.064e+00 | 0.0188 | 73.0 | 8.74% | 2919.4 | 6.20% | motif file (matrix) |
svg |
46 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -6.011e+00 | 0.0194 | 51.0 | 6.11% | 1890.1 | 4.02% | motif file (matrix) |
svg |
47 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -5.992e+00 | 0.0194 | 112.0 | 13.41% | 4845.6 | 10.30% | motif file (matrix) |
svg |
48 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.668e+00 | 0.0262 | 75.0 | 8.98% | 3064.9 | 6.51% | motif file (matrix) |
svg |
49 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -5.421e+00 | 0.0328 | 33.0 | 3.95% | 1130.9 | 2.40% | motif file (matrix) |
svg |
50 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -5.419e+00 | 0.0328 | 44.0 | 5.27% | 1625.2 | 3.45% | motif file (matrix) |
svg |
51 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -5.062e+00 | 0.0452 | 56.0 | 6.71% | 2224.1 | 4.73% | motif file (matrix) |
svg |
52 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.056e+00 | 0.0452 | 36.0 | 4.31% | 1294.9 | 2.75% | motif file (matrix) |
svg |
53 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.850e+00 | 0.0538 | 24.0 | 2.87% | 781.9 | 1.66% | motif file (matrix) |
svg |
54 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-2 | -4.831e+00 | 0.0538 | 17.0 | 2.04% | 491.4 | 1.04% | motif file (matrix) |
svg |
55 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.732e+00 | 0.0583 | 18.0 | 2.16% | 537.5 | 1.14% | motif file (matrix) |
svg |
56 |
| Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.674e+00 | 0.0607 | 123.0 | 14.73% | 5629.9 | 11.96% | motif file (matrix) |
svg |