Information for 10-ATGCAGCAGC (Motif 18)

C G T A A C G T A C T G A G T C C G T A A C T G A G T C C T G A C T A G A G T C
Reverse Opposite:
A C T G A G T C A G C T C T A G A G T C A C G T A C T G A G T C C G T A A C G T
p-value:1e-6
log p-value:-1.540e+01
Information Content per bp:1.931
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif46.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets54.1 +/- 28.9bp
Average Position of motif in Background48.7 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATGCAGCAGC-
-CGCAGCTGCG
 C G T A A C G T A C T G A G T C C G T A A C T G A G T C C T G A C T A G A G T C A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATGCAGCAGC--
--NCAGCTGCTG
 C G T A A C G T A C T G A G T C C G T A A C T G A G T C C T G A C T A G A G T C A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATGCAGCAGC---
-AGCAGCTGCTNN
 C G T A A C G T A C T G A G T C C G T A A C T G A G T C C T G A C T A G A G T C A C G T A C G T A C G T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATGCAGCAGC----
ATGTACAGTAGCAAAG
 A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C C T G A C T A G A G T C A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATGCAGCAGC-
-AGCAGCTGCT
 C G T A A C G T A C T G A G T C C G T A A C T G A G T C C T G A C T A G A G T C A C G T
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGCAGCAGC----
ADGGYAGYAGCATCT
 A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C C T G A C T A G A G T C A C G T A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ATGCAGCAGC-
---CAGCTGNT
 C G T A A C G T A C T G A G T C C G T A A C T G A G T C C T G A C T A G A G T C A C G T
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGCAGCAGC----
ATTTACAGTAGCAAAA
 A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C C T G A C T A G A G T C A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATGCAGCAGC---
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C T G A G T C C T G A C T A G A G T C A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATGCAGCAGC--
--GCAGCTGTNN
 C G T A A C G T A C T G A G T C C G T A A C T G A G T C C T G A C T A G A G T C A C G T A C G T
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T