Information for 16-BCATCTCTAAACT (Motif 19)

A C T G T G A C C G T A A C G T A G T C A C G T A G T C A C G T C G T A C G T A C G T A G T A C A C G T
Reverse Opposite:
C G T A C A T G A C G T A C G T A C G T C G T A A C T G C G T A A C T G G T C A C G A T A C T G T A G C
p-value:1e-9
log p-value:-2.112e+01
Information Content per bp:1.846
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 27.6bp
Average Position of motif in Background66.0 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:BCATCTCTAAACT
AGGTCTCTAACC-
 A C T G T G A C C G T A A C G T A G T C A C G T A G T C A C G T C G T A C G T A C G T A G T A C A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:BCATCTCTAAACT
---TGTCTAGACG
 A C T G T G A C C G T A A C G T A G T C A C G T A G T C A C G T C G T A C G T A C G T A G T A C A C G T
A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:BCATCTCTAAACT-
--NGYCATAAAWCH
 A C T G T G A C C G T A A C G T A G T C A C G T A G T C A C G T C G T A C G T A C G T A G T A C A C G T A C G T
A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

PB0034.1_Irf4_1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:BCATCTCTAAACT---
-CGTATCGAAACCAAA
 A C T G T G A C C G T A A C G T A G T C A C G T A G T C A C G T C G T A C G T A C G T A G T A C A C G T A C G T A C G T A C G T
A C G T T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

Foxq1/MA0040.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:BCATCTCTAAACT---
-----AATAAACAATN
 A C T G T G A C C G T A A C G T A G T C A C G T A G T C A C G T C G T A C G T A C G T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:BCATCTCTAAACT---
CTACCAATAAAATTCT
 A C T G T G A C C G T A A C G T A G T C A C G T A G T C A C G T C G T A C G T A C G T A G T A C A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:BCATCTCTAAACT-
--WWATRTAAACAN
 A C T G T G A C C G T A A C G T A G T C A C G T A G T C A C G T C G T A C G T A C G T A G T A C A C G T A C G T
A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:BCATCTCTAAACT
--NSCACTYVAV-
 A C T G T G A C C G T A A C G T A G T C A C G T A G T C A C G T C G T A C G T A C G T A G T A C A C G T
A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:BCATCTCTAAACT--
-----GCTAAACGGT
 A C T G T G A C C G T A A C G T A G T C A C G T A G T C A C G T C G T A C G T A C G T A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

PB0021.1_Gata3_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--BCATCTCTAAACT-------
NNTNANTTCTTATCTCTANANN
 A C G T A C G T A C T G T G A C C G T A A C G T A G T C A C G T A G T C A C G T C G T A C G T A C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A