Information for 14-DCTGTGBCTATGC (Motif 17)

C G A T A G T C A C G T A C T G A C G T T A C G A C G T A G T C A C G T G T C A C G A T A C T G A G T C
Reverse Opposite:
T A C G A G T C C G T A C A G T C G T A A C T G T G C A A T G C G T C A G T A C C G T A A C T G G C T A
p-value:1e-9
log p-value:-2.228e+01
Information Content per bp:1.743
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif46.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets43.0 +/- 19.3bp
Average Position of motif in Background49.0 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:DCTGTGBCTATGC
-CTGTTGCTAGGS
 C G A T A G T C A C G T A C T G A C G T T A C G A C G T A G T C A C G T G T C A C G A T A C T G A G T C
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:DCTGTGBCTATGC--
NCCGTTGCTANGNGN
 C G A T A G T C A C G T A C T G A C G T T A C G A C G T A G T C A C G T G T C A C G A T A C T G A G T C A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:DCTGTGBCTATGC
ACTTTCACTTTC-
 C G A T A G T C A C G T A C T G A C G T T A C G A C G T A G T C A C G T G T C A C G A T A C T G A G T C
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---DCTGTGBCTATGC
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T C G A T A G T C A C G T A C T G A C G T T A C G A C G T A G T C A C G T G T C A C G A T A C T G A G T C
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:DCTGTGBCTATGC
GCTGTG-------
 C G A T A G T C A C G T A C T G A C G T T A C G A C G T A G T C A C G T G T C A C G A T A C T G A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--DCTGTGBCTATGC
TCACTTTCACTTTCN
 A C G T A C G T C G A T A G T C A C G T A C T G A C G T T A C G A C G T A G T C A C G T G T C A C G A T A C T G A G T C
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:DCTGTGBCTATGC--
NNCGTTGCTATGGNN
 C G A T A G T C A C G T A C T G A C G T T A C G A C G T A G T C A C G T G T C A C G A T A C T G A G T C A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----DCTGTGBCTATGC------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T C G A T A G T C A C G T A C T G A C G T T A C G A C G T A G T C A C G T G T C A C G A T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----DCTGTGBCTATGC
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C A C G T A C T G A C G T T A C G A C G T A G T C A C G T G T C A C G A T A C T G A G T C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:DCTGTGBCTATGC
-CTGTTCCTGG--
 C G A T A G T C A C G T A C T G A C G T T A C G A C G T A G T C A C G T G T C A C G A T A C T G A G T C
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T