p-value: | 1e-9 |
log p-value: | -2.158e+01 |
Information Content per bp: | 1.913 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.25% |
Number of Background Sequences with motif | 33.0 |
Percentage of Background Sequences with motif | 0.07% |
Average Position of motif in Targets | 50.7 +/- 26.6bp |
Average Position of motif in Background | 48.4 +/- 26.4bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAAGTGTCTT TTRAGTGSYK- |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AAAGTGTCTT TTAAGTGGN-- |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AAAGTGTCTT TTAAGTGCTT- |
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PROX1/MA0794.1/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AAAGTGTCTT- TAAGGCGTCTTG |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AAAGTGTCTT- AATNTTAAGTGGNTNN |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AAAGTGTCTT- AATTTCAAGTGGCTTN |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AAAGTGTCTT TTGAGTGSTT- |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AAAGTGTCTT TTAAGTGGT-- |
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PH0171.1_Nkx2-1/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AAAGTGTCTT- AANTTCAAGTGGCTTN |
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NKX2-8/MA0673.1/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAAGTGTCTT NTCAAGTGG--- |
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