Information for 9-TCTTAATCCC (Motif 13)

A C G T A T G C C G A T C G A T C T G A T C G A A G C T A G T C T A G C A G T C
Reverse Opposite:
A C T G A T C G A C T G C T G A A G C T A G C T C G T A C G T A A T C G T G C A
p-value:1e-12
log p-value:-2.898e+01
Information Content per bp:1.839
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif85.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets41.9 +/- 22.1bp
Average Position of motif in Background56.3 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.84
Offset:1
Orientation:forward strand
Alignment:TCTTAATCCC
-CTTAATCCC
 A C G T A T G C C G A T C G A T C T G A T C G A A G C T A G T C T A G C A G T C
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--TCTTAATCCC-----
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A T G C C G A T C G A T C T G A T C G A A G C T A G T C T A G C A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.82
Offset:2
Orientation:forward strand
Alignment:TCTTAATCCC
--TTAATCCC
 A C G T A T G C C G A T C G A T C T G A T C G A A G C T A G T C T A G C A G T C
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.81
Offset:1
Orientation:forward strand
Alignment:TCTTAATCCC-
-NYTAATCCYB
 A C G T A T G C C G A T C G A T C T G A T C G A A G C T A G T C T A G C A G T C A C G T
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PH0130.1_Otx2/Jaspar

Match Rank:5
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---TCTTAATCCC----
GANNATTAATCCCTNNN
 A C G T A C G T A C G T A C G T A T G C C G A T C G A T C T G A T C G A A G C T A G T C T A G C A G T C A C G T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.80
Offset:2
Orientation:forward strand
Alignment:TCTTAATCCC
--TTAATCCT
 A C G T A T G C C G A T C G A T C T G A T C G A A G C T A G T C T A G C A G T C
A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:7
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---TCTTAATCCC----
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T A C G T A T G C C G A T C G A T C T G A T C G A A G C T A G T C T A G C A G T C A C G T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PH0123.1_Obox3/Jaspar

Match Rank:8
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TCTTAATCCC-----
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A T G C C G A T C G A T C T G A T C G A A G C T A G T C T A G C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0129.1_Otx1/Jaspar

Match Rank:9
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---TCTTAATCCC----
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T A C G T A T G C C G A T C G A T C T G A T C G A A G C T A G T C T A G C A G T C A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.79
Offset:1
Orientation:forward strand
Alignment:TCTTAATCCC-
-CCTAATCCGC
 A C G T A T G C C G A T C G A T C T G A T C G A A G C T A G T C T A G C A G T C A C G T
A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C