Information for 6-AGCCACTKAGTGGCTG (Motif 11)

G C T A A C T G G T A C A G T C C G T A A G T C A C G T C A G T C G T A C T A G C G A T C T A G A C T G A G T C A C G T A T C G
Reverse Opposite:
T A G C G T C A A C T G T G A C A G T C C G T A A G T C C G A T G T C A C G T A C T A G C G A T C T A G A C T G A G T C C A G T
p-value:1e-14
log p-value:-3.235e+01
Information Content per bp:1.759
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.3 +/- 20.5bp
Average Position of motif in Background60.0 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCCACTKAGTGGCTG
MRSCACTYAA------
 G C T A A C T G G T A C A G T C C G T A A G T C A C G T C A G T C G T A C T A G C G A T C T A G A C T G A G T C A C G T A T C G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGCCACTKAGTGGCTG
-ACCACTTAA------
 G C T A A C T G G T A C A G T C C G T A A G T C A C G T C A G T C G T A C T A G C G A T C T A G A C T G A G T C A C G T A T C G
A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGCCACTKAGTGGCTG
-ACCACTTAA------
 G C T A A C T G G T A C A G T C C G T A A G T C A C G T C A G T C G T A C T A G C G A T C T A G A C T G A G T C A C G T A T C G
A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGCCACTKAGTGGCTG
AASCACTCAA------
 G C T A A C T G G T A C A G T C C G T A A G T C A C G T C A G T C G T A C T A G C G A T C T A G A C T G A G T C A C G T A T C G
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCCACTKAGTGGCTG
CTTAACCACTTAAGGAT--
 A C G T A C G T A C G T G C T A A C T G G T A C A G T C C G T A A G T C A C G T C A G T C G T A C T A G C G A T C T A G A C T G A G T C A C G T A T C G
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCCACTKAGTGGCTG
ACTAGCCAATCA-------
 A C G T A C G T A C G T G C T A A C T G G T A C A G T C C G T A A G T C A C G T C A G T C G T A C T A G C G A T C T A G A C T G A G T C A C G T A T C G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCCACTKAGTGGCTG
AGCCAATCGG------
 G C T A A C T G G T A C A G T C C G T A A G T C A C G T C A G T C G T A C T A G C G A T C T A G A C T G A G T C A C G T A T C G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCACTKAGTGGCTG
YDGHTACAWTGTADC--
 A C G T G C T A A C T G G T A C A G T C C G T A A G T C A C G T C A G T C G T A C T A G C G A T C T A G A C T G A G T C A C G T A T C G
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGCCACTKAGTGGCTG
-----TTAAGTGCTT-
 G C T A A C T G G T A C A G T C C G T A A G T C A C G T C A G T C G T A C T A G C G A T C T A G A C T G A G T C A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGCCACTKAGTGGCTG
----CTTGAGTGGCT-
 G C T A A C T G G T A C A G T C C G T A A G T C A C G T C A G T C G T A C T A G C G A T C T A G A C T G A G T C A C G T A T C G
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T