Information for 7-AAAGCCTTTGTTTTMW (Motif 8)

C T G A C G T A C G T A A C T G A T G C G T A C A C G T A G C T A G C T T C A G C G A T C G A T C G A T C A G T T G A C C G A T
Reverse Opposite:
G C T A A C T G G T C A C G T A G C T A C G T A A G T C C T G A C T G A C G T A A C T G A T C G A G T C C G A T C G A T A G C T
p-value:1e-16
log p-value:-3.792e+01
Information Content per bp:1.692
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif20.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets55.4 +/- 29.5bp
Average Position of motif in Background52.8 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AAAGCCTTTGTTTTMW
----CCTTTGTTTT--
 C T G A C G T A C G T A A C T G A T G C G T A C A C G T A G C T A G C T T C A G C G A T C G A T C G A T C A G T T G A C C G A T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAAGCCTTTGTTTTMW-
TNNTCCTTTGTTCTNNT
 C T G A C G T A C G T A A C T G A T G C G T A C A C G T A G C T A G C T T C A G C G A T C G A T C G A T C A G T T G A C C G A T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AAAGCCTTTGTTTTMW
----CCTTTGTT----
 C T G A C G T A C G T A A C T G A T G C G T A C A C G T A G C T A G C T T C A G C G A T C G A T C G A T C A G T T G A C C G A T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAAGCCTTTGTTTTMW-
NNNTCCTTTGTTCTNNN
 C T G A C G T A C G T A A C T G A T G C G T A C A C G T A G C T A G C T T C A G C G A T C G A T C G A T C A G T T G A C C G A T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAAGCCTTTGTTTTMW-
-ANTCCTTTGTCTNNNN
 C T G A C G T A C G T A A C T G A T G C G T A C A C G T A G C T A G C T T C A G C G A T C G A T C G A T C A G T T G A C C G A T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AAAGCCTTTGTTTTMW
----CCWTTGTY----
 C T G A C G T A C G T A A C T G A T G C G T A C A C G T A G C T A G C T T C A G C G A T C G A T C G A T C A G T T G A C C G A T
A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAGCCTTTGTTTTMW
AGGVNCCTTTGT-----
 A C G T C T G A C G T A C G T A A C T G A T G C G T A C A C G T A G C T A G C T T C A G C G A T C G A T C G A T C A G T T G A C C G A T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAAGCCTTTGTTTTMW
----CCWTTGTYYB--
 C T G A C G T A C G T A A C T G A T G C G T A C A C G T A G C T A G C T T C A G C G A T C G A T C G A T C A G T T G A C C G A T
A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAAGCCTTTGTTTTMW
----YCTTTGTTCC--
 C T G A C G T A C G T A A C T G A T G C G T A C A C G T A G C T A G C T T C A G C G A T C G A T C G A T C A G T T G A C C G A T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAAGCCTTTGTTTTMW
----CCATTGTTTT--
 C T G A C G T A C G T A A C T G A T G C G T A C A C G T A G C T A G C T T C A G C G A T C G A T C G A T C A G T T G A C C G A T
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T