Information for 23-GGCCATTCTG (Motif 43)

A C T G A C T G A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A C G T A A C G T A C T G A C T G A G T C A G T C
p-value:1e-4
log p-value:-1.098e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 19.5bp
Average Position of motif in Background62.2 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGCCATTCTG
GCNGCCATCTTG
 A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGCCATTCTG-
NNGCACCTTTCTCC
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C T G A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCCATTCTG
AGCCAATCGG
 A C T G A C T G A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCCATTCTG----
NNNCCATTGTGTNAN
 A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCCATTCTG-
-NCCATTGTTY
 A C T G A C T G A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C T G A C G T
A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGCCATTCTG
--CCTTTGTT
 A C T G A C T G A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C T G
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCCATTCTG
GGCCATTAAC
 A C T G A C T G A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C T G
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGCCATTCTG--
--CCATTGTTYB
 A C T G A C T G A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

NFYB/MA0502.1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GGCCATTCTG
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGCCATTCTG
GCCGCCATCTTG
 A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G